STRINGSTRING
ALV05614.1 ALV05614.1 ALV05836.1 ALV05836.1 ALV06479.1 ALV06479.1 ALV07335.1 ALV07335.1 ALV07336.1 ALV07336.1 ALV07337.1 ALV07337.1 ALV07430.1 ALV07430.1 ALV07833.1 ALV07833.1 ALV07846.1 ALV07846.1 ALV07847.1 ALV07847.1 ALV08246.1 ALV08246.1 ALV04959.1 ALV04959.1 ALV04960.1 ALV04960.1 ALV04961.1 ALV04961.1 ALV09222.1 ALV09222.1 ALV09223.1 ALV09223.1 ALV05168.1 ALV05168.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALV05614.1Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (185 aa)
ALV05836.1Poly(R)-hydroxyalkanoic acid synthase, class I; Pfam:pfam07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus. (580 aa)
ALV06479.1Esterase; Pfam:pfam06850 PHB de-polymerase C-terminus. (437 aa)
ALV07335.1Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)
ALV07336.1Pfam:pfam06314 Acetoacetate decarboxylase (ADC). (249 aa)
ALV07337.1Membrane protein; Pfam:pfam12536 Patatin phospholipase. (409 aa)
ALV07430.1Patatin; Pfam:pfam01734 Patatin-like phospholipase. (373 aa)
ALV07833.1Polyhydroxyalkanoate synthesis repressor PhaR; Pfam:pfam07879 PHB/PHA accumulation regulator DNA-binding domain. (196 aa)
ALV07846.1Pfam:pfam12697 Alpha/beta hydrolase family. (290 aa)
ALV07847.1Pfam:pfam00106 short chain dehydrogenase. (260 aa)
ALV08246.1Polyisoprenoid-binding protein; Pfam:pfam04264 YceI-like domain; Belongs to the UPF0312 family. (194 aa)
ALV04959.1Hypothetical protein; Pfam:pfam04264 YceI-like domain; Belongs to the UPF0312 family. (189 aa)
ALV04960.1YceI family protein; Pfam:pfam04264 YceI-like domain; Belongs to the UPF0312 family. (226 aa)
ALV04961.1Putative [Ni] hydrogenase, b-type cytochrome subunit; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (189 aa)
ALV09222.1Putative periplasmic glucans biosynthesis transmembrane protein; Pfam:pfam13632 Glycosyl transferase family group 2. (700 aa)
ALV09223.1Putative periplasmic glucans biosynthesis signal peptide protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (494 aa)
ALV05168.1Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. (183 aa)
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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