STRINGSTRING
ALV07081.1 ALV07081.1 ALV07093.1 ALV07093.1 ALV07094.1 ALV07094.1 ALV07095.1 ALV07095.1 ALV07096.1 ALV07096.1 ALV04917.1 ALV04917.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALV07081.1Pfam:pfam00920 Dehydratase family; Belongs to the IlvD/Edd family. (582 aa)
ALV07093.1Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. (480 aa)
ALV07094.1Pfam:pfam00701 Dihydrodipicolinate synthetase family; Belongs to the DapA family. (309 aa)
ALV07095.1Short-chain alcohol dehydrogenase like protein; Pfam:pfam00106 short chain dehydrogenase. (251 aa)
ALV07096.1Gluconolaconase; Pfam:pfam08450 SMP-30/Gluconolaconase/LRE-like region. (304 aa)
ALV04917.1Gluconolactonase; Pfam:pfam08450 SMP-30/Gluconolaconase/LRE-like region. (312 aa)
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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