STRINGSTRING
ALV07282.1 ALV07282.1 ALV07256.1 ALV07256.1 ALV07238.1 ALV07238.1 ALV07173.1 ALV07173.1 ALV07172.1 ALV07172.1 ALV07686.1 ALV07686.1 xseA xseA ALV07803.1 ALV07803.1 ALV07837.1 ALV07837.1 ALV07846.1 ALV07846.1 ALV07873.1 ALV07873.1 ALV07882.1 ALV07882.1 ALV07885.1 ALV07885.1 ALV07886.1 ALV07886.1 ALV07887.1 ALV07887.1 ALV07888.1 ALV07888.1 ALV07889.1 ALV07889.1 ALV07890.1 ALV07890.1 ALV07891.1 ALV07891.1 ALV07898.1 ALV07898.1 ALV07902.1 ALV07902.1 ALV07998.1 ALV07998.1 ALV08009.1 ALV08009.1 ALV08063.1 ALV08063.1 ALV04866.1 ALV04866.1 ALV08085.1 ALV08085.1 ALV08101.1 ALV08101.1 ALV07283.1 ALV07283.1 glpK glpK ALV07600.1 ALV07600.1 ALV07305.1 ALV07305.1 ALV07603.1 ALV07603.1 bpt bpt ALV07426.1 ALV07426.1 gcvH gcvH gcvP gcvP ALV08105.1 ALV08105.1 ALV07439.1 ALV07439.1 murQ murQ pnp pnp ALV07498.1 ALV07498.1 ALV04807.1 ALV04807.1 ALV07526.1 ALV07526.1 ALV07529.1 ALV07529.1 ALV05470.1 ALV05470.1 anmK anmK RD2015_93 RD2015_93 ALV05417.1 ALV05417.1 RD2015_90 RD2015_90 ALV05377.1 ALV05377.1 ALV05358.1 ALV05358.1 ALV05357.1 ALV05357.1 ALV05348.1 ALV05348.1 ALV05345.1 ALV05345.1 ALV05339.1 ALV05339.1 ALV05338.1 ALV05338.1 ALV05327.1 ALV05327.1 ALV05322.1 ALV05322.1 ALV05320.1 ALV05320.1 ALV05283.1 ALV05283.1 ALV05259.1 ALV05259.1 ALV05248.1 ALV05248.1 ALV05243.1 ALV05243.1 ALV05212.1 ALV05212.1 ALV05211.1 ALV05211.1 ALV05194.1 ALV05194.1 RD2015_62 RD2015_62 ALV05100.1 ALV05100.1 ALV05017.1 ALV05017.1 psuG psuG ALV04999.1 ALV04999.1 ALV09273.1 ALV09273.1 ALV09272.1 ALV09272.1 ALV09215.1 ALV09215.1 ALV09214.1 ALV09214.1 ALV09206.1 ALV09206.1 ALV09205.1 ALV09205.1 ALV04977.1 ALV04977.1 ALV09136.1 ALV09136.1 ALV09123.1 ALV09123.1 ALV09059.1 ALV09059.1 ALV08999.1 ALV08999.1 ALV04955.1 ALV04955.1 ALV08913.1 ALV08913.1 ALV08896.1 ALV08896.1 ALV08856.1 ALV08856.1 ALV08843.1 ALV08843.1 ALV08821.1 ALV08821.1 ALV08816.1 ALV08816.1 ALV08795.1 ALV08795.1 ALV08794.1 ALV08794.1 ALV08788.1 ALV08788.1 ALV08781.1 ALV08781.1 ALV08776.1 ALV08776.1 ALV08750.1 ALV08750.1 ALV08704.1 ALV08704.1 ALV08691.1 ALV08691.1 ALV08684.1 ALV08684.1 ALV08671.1 ALV08671.1 ALV08670.1 ALV08670.1 katG katG ALV08625.1 ALV08625.1 ALV08598.1 ALV08598.1 RD2015_41 RD2015_41 ALV04910.1 ALV04910.1 ALV08514.1 ALV08514.1 ALV08480.1 ALV08480.1 ALV04906.1 ALV04906.1 ALV04905.1 ALV04905.1 rne rne ALV08432.1 ALV08432.1 ALV08421.1 ALV08421.1 ALV08419.1 ALV08419.1 ALV08418.1 ALV08418.1 ALV08391.1 ALV08391.1 ALV08345.1 ALV08345.1 hutH hutH hutU hutU hutI hutI ureA ureA ureB ureB ureC ureC gloB gloB rnhA rnhA ALV08188.1 ALV08188.1 ALV08186.1 ALV08186.1 ALV08166.1 ALV08166.1 rph rph ALV08162.1 ALV08162.1 kynA kynA kynU kynU kynB kynB ALV08131.1 ALV08131.1 ALV08114.1 ALV08114.1 ALV07596.1 ALV07596.1 ALV07598.1 ALV07598.1 ALV07599.1 ALV07599.1 ALV07164.1 ALV07164.1 ALV07107.1 ALV07107.1 ALV07104.1 ALV07104.1 ALV04766.1 ALV04766.1 ALV07080.1 ALV07080.1 ALV07019.1 ALV07019.1 ALV07017.1 ALV07017.1 ALV07015.1 ALV07015.1 ALV07011.1 ALV07011.1 ALV07000.1 ALV07000.1 ALV06969.1 ALV06969.1 ALV05520.1 ALV05520.1 ALV05530.1 ALV05530.1 rppH rppH ALV05644.1 ALV05644.1 ALV05681.1 ALV05681.1 ALV05683.1 ALV05683.1 ALV05707.1 ALV05707.1 ALV05729.1 ALV05729.1 dtd dtd ALV05777.1 ALV05777.1 ALV05784.1 ALV05784.1 ALV05815.1 ALV05815.1 ALV04638.1 ALV04638.1 ALV05850.1 ALV05850.1 ALV05882.1 ALV05882.1 ALV05884.1 ALV05884.1 ALV05888.1 ALV05888.1 ALV05894.1 ALV05894.1 ALV04650.1 ALV04650.1 ALV05949.1 ALV05949.1 ALV05959.1 ALV05959.1 ALV05990.1 ALV05990.1 rnhB rnhB ALV04658.1 ALV04658.1 ALV06025.1 ALV06025.1 ALV06026.1 ALV06026.1 ALV06028.1 ALV06028.1 ALV06029.1 ALV06029.1 ALV06045.1 ALV06045.1 ALV06046.1 ALV06046.1 ALV06072.1 ALV06072.1 ALV06089.1 ALV06089.1 ALV06094.1 ALV06094.1 ALV06103.1 ALV06103.1 ALV06126.1 ALV06126.1 xseB xseB ALV04670.1 ALV04670.1 ALV06178.1 ALV06178.1 ALV06241.1 ALV06241.1 ALV04686.1 ALV04686.1 ALV04687.1 ALV04687.1 ALV06322.1 ALV06322.1 ALV06369.1 ALV06369.1 ALV06377.1 ALV06377.1 ALV06379.1 ALV06379.1 ALV06382.1 ALV06382.1 dut dut ALV06394.1 ALV06394.1 ALV04710.1 ALV04710.1 ALV06550.1 ALV06550.1 surE surE ALV04718.1 ALV04718.1 ALV06705.1 ALV06705.1 ALV06851.1 ALV06851.1 edd edd ALV06867.1 ALV06867.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
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ALV07282.1Pfam:pfam02055 O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family. (466 aa)
ALV07256.1NADH pyrophosphatase; Pfam:pfam00293 NUDIX domain. (175 aa)
ALV07238.12`,3`-cyclic-nucleotide 2`-phosphodiesterase; Pfam:pfam02872 5'-nucleotidase, C-terminal domain; Belongs to the 5'-nucleotidase family. (655 aa)
ALV07173.1Xanthine dehydrogenase; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase. (321 aa)
ALV07172.1(2Fe-2S)-binding domain protein; Pfam:pfam01799 [2Fe-2S] binding domain. (289 aa)
ALV07686.1Thioesterase; Pfam:pfam13279 Thioesterase-like superfamily. (139 aa)
xseAExodeoxyribonuclease VII; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (519 aa)
ALV07803.1Malonate decarboxylase, alpha subunit. (556 aa)
ALV07837.1Asp/Glu/hydantoin racemase; Pfam:pfam01613 Flavin reductase like domain. (199 aa)
ALV07846.1Pfam:pfam12697 Alpha/beta hydrolase family. (290 aa)
ALV07873.1Hydrolase; Pfam:pfam13483 Beta-lactamase superfamily domain; Belongs to the UPF0173 family. (288 aa)
ALV07882.1Phenylacetic acid degradation protein paaN; Pfam:pfam00171 Aldehyde dehydrogenase family. (685 aa)
ALV07885.1Phenylacetic acid degradation protein; Pfam:pfam00175 Oxidoreductase NAD-binding domain. (359 aa)
ALV07886.1Phenylacetate-CoA oxygenase, PaaJ subunit; Pfam:pfam01883 Domain of unknown function DUF59. (182 aa)
ALV07887.1Phenylacetate-CoA oxygenase, PaaI subunit; Pfam:pfam05138 Phenylacetic acid catabolic protein. (271 aa)
ALV07888.1phenylacetate-CoA oxygenase subunit PaaB; Pfam:pfam06243 Phenylacetic acid degradation B. (101 aa)
ALV07889.1phenylacetate-CoA oxygenase; Pfam:pfam05138 Phenylacetic acid catabolic protein. (333 aa)
ALV07890.1Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (436 aa)
ALV07891.1Phenylacetic acid degradation protein; Pfam:pfam03061 Thioesterase superfamily. (166 aa)
ALV07898.1Putative membrane protein; Pfam:pfam06127 Protein of unknown function (DUF962). (176 aa)
ALV07902.1Hypothetical protein. (194 aa)
ALV07998.1Cellulase; Pfam:pfam00150 Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. (594 aa)
ALV08009.1RNA helicase; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (653 aa)
ALV08063.12-hydroxychromene-2-carboxylate isomerase; Pfam:pfam01323 DSBA-like thioredoxin domain. (215 aa)
ALV04866.1Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (410 aa)
ALV08085.1Phosphoserine phosphatase; Pfam:pfam12710 haloacid dehalogenase-like hydrolase. (222 aa)
ALV08101.1Aldehyde-activating protein. (120 aa)
ALV07283.1Pfam:pfam01126 Heme oxygenase. (218 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (497 aa)
ALV07600.1Carboxymethylenebutenolidase; Pfam:pfam01738 Dienelactone hydrolase family. (269 aa)
ALV07305.1Pfam:pfam02872 5'-nucleotidase, C-terminal domain; Belongs to the 5'-nucleotidase family. (590 aa)
ALV07603.1Amidohydrolase; Pfam:pfam13594 Amidohydrolase. (1160 aa)
bptPutative arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. (244 aa)
ALV07426.1Pfam:pfam01571 Aminomethyltransferase folate-binding domain. (374 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (124 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (962 aa)
ALV08105.1Alpha-1,6-glucosidase; Pfam:pfam11852 Domain of unknown function (DUF3372); Belongs to the glycosyl hydrolase 13 family. (934 aa)
ALV07439.1Glycoside hydrolase family 19. (240 aa)
murQN-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling. (297 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (710 aa)
ALV07498.1Hypothetical protein; Pfam:pfam08282 haloacid dehalogenase-like hydrolase. (291 aa)
ALV04807.1Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; Pfam:pfam13478 XdhC Rossmann domain. (332 aa)
ALV07526.1Carbohydrate binding family 6; Pfam:pfam00030 Beta/Gamma crystallin. (582 aa)
ALV07529.1Hypothetical protein; Pfam:pfam13449 Esterase-like activity of phytase. (395 aa)
ALV05470.1Deoxyguanosinetriphosphate triphosphohydrolase; Pfam:pfam13286 Phosphohydrolase-associated domain; Belongs to the dGTPase family. Type 2 subfamily. (379 aa)
anmKAnhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (372 aa)
RD2015_93MazG nucleotide pyrophosphohydrolase. (109 aa)
ALV05417.1Putative 2-hydroxy-3-oxopropionate reductase; Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase. (300 aa)
RD2015_90Putative signal peptide protein; Pfam:pfam02265 S1/P1 Nuclease. (345 aa)
ALV05377.1Pfam:pfam12697 Alpha/beta hydrolase family. (277 aa)
ALV05358.1Hypothetical protein; Pfam:pfam13665 Domain of unknown function (DUF4150). (129 aa)
ALV05357.1Hypothetical protein; Pfam:pfam15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2. (463 aa)
ALV05348.12-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (273 aa)
ALV05345.1Cysteine hydrolase. (291 aa)
ALV05339.1(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain. (222 aa)
ALV05338.1Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase. (369 aa)
ALV05327.1Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (375 aa)
ALV05322.1Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain. (392 aa)
ALV05320.1DNA-binding protein. (99 aa)
ALV05283.1Pfam:pfam00857 Isochorismatase family. (193 aa)
ALV05259.1Hypothetical protein. (640 aa)
ALV05248.1Pfam:pfam07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase). (412 aa)
ALV05243.1Endoglucanase; Pfam:pfam00150 Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. (360 aa)
ALV05212.1Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family. (259 aa)
ALV05211.1Pfam:pfam04828 Glutathione-dependent formaldehyde-activating enzyme. (135 aa)
ALV05194.1DoxD-like family protein; Pfam:pfam07681 DoxX. (282 aa)
RD2015_62Dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold. (341 aa)
ALV05100.1Pfam:pfam07793 Protein of unknown function (DUF1631). (824 aa)
ALV05017.1Sigma54 specific transcriptional regulator with GAF sensor, Fis family; Pfam:pfam00158 Sigma-54 interaction domain. (862 aa)
psuGPseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. (315 aa)
ALV04999.1Pfam:pfam01738 Dienelactone hydrolase family. (222 aa)
ALV09273.1Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (281 aa)
ALV09272.1Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain. (138 aa)
ALV09215.1Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase. (734 aa)
ALV09214.1Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; Pfam:pfam01799 [2Fe-2S] binding domain. (167 aa)
ALV09206.1Putative isoquinoline 1-oxidoreductase beta subunit; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase. (746 aa)
ALV09205.1(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain. (159 aa)
ALV04977.1Hypothetical protein. (339 aa)
ALV09136.1Pfam:pfam02112 cAMP phosphodiesterases class-II. (260 aa)
ALV09123.1Hypothetical protein; Pfam:pfam10029 Predicted periplasmic protein (DUF2271). (180 aa)
ALV09059.1Hydrolase; Pfam:pfam02230 Phospholipase/Carboxylesterase. (234 aa)
ALV08999.1Glyoxalase; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (139 aa)
ALV04955.1Hypothetical protein. (886 aa)
ALV08913.1Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. (508 aa)
ALV08896.1Pfam:pfam04892 VanZ like family. (403 aa)
ALV08856.1Pfam:pfam03992 Antibiotic biosynthesis monooxygenase. (121 aa)
ALV08843.1Assimilatory nitrite reductase (NAD(P)H) large subunit; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (836 aa)
ALV08821.1Zn-dependent hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. (351 aa)
ALV08816.1Pfam:pfam02230 Phospholipase/Carboxylesterase. (228 aa)
ALV08795.1Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase. (720 aa)
ALV08794.1Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; Pfam:pfam01799 [2Fe-2S] binding domain. (158 aa)
ALV08788.1Hypothetical protein. (429 aa)
ALV08781.1Hydroxymethylglutaryl-CoA lyase YngG; Pfam:pfam00682 HMGL-like. (311 aa)
ALV08776.1Phenylacetate-coenzyme A ligase; Pfam:pfam00501 AMP-binding enzyme. (449 aa)
ALV08750.1Beta-lactamase domain protein; Pfam:pfam00753 Metallo-beta-lactamase superfamily. (259 aa)
ALV08704.1Pfam:pfam07793 Protein of unknown function (DUF1631). (671 aa)
ALV08691.1Pfam:pfam12697 Alpha/beta hydrolase family. (310 aa)
ALV08684.1Alanine acetyltransferase; Pfam:pfam04828 Glutathione-dependent formaldehyde-activating enzyme. (155 aa)
ALV08671.1Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (446 aa)
ALV08670.1RNA helicase; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (446 aa)
katGHydroperoxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (729 aa)
ALV08625.1Pfam:pfam04295 D-galactarate dehydratase / Altronate hydrolase, C terminus. (527 aa)
ALV08598.1Hypothetical protein. (196 aa)
RD2015_41Pfam:pfam12697 Alpha/beta hydrolase family. (299 aa)
ALV04910.1Fumarylacetoacetase domain-containing protein; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (261 aa)
ALV08514.1Oxidoreductase domain protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold. (351 aa)
ALV08480.1Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (505 aa)
ALV04906.1Monooxygenase FAD-binding protein; Pfam:pfam01494 FAD binding domain. (424 aa)
ALV04905.1S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (286 aa)
rneRibonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (1060 aa)
ALV08432.1Gamma-glutamyltransferase; Pfam:pfam01019 Gamma-glutamyltranspeptidase. (541 aa)
ALV08421.1Glucarate dehydratase; Pfam:pfam13378 Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (443 aa)
ALV08419.1Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family. (260 aa)
ALV08418.12-hydroxy-3-oxopropionate reductase; Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase. (294 aa)
ALV08391.1Mazg nucleotide pyrophosphohydrolase. (396 aa)
ALV08345.1Thioesterase; Pfam:pfam13279 Thioesterase-like superfamily. (148 aa)
hutHHistidine ammonia-lyase; Pfam:pfam00221 Aromatic amino acid lyase. (516 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (560 aa)
hutIImidazolonepropionase; Pfam:pfam13147 Amidohydrolase. (411 aa)
ureAPfam:pfam00547 Urease, gamma subunit; Belongs to the urease gamma subunit family. (100 aa)
ureBPfam:pfam00699 Urease beta subunit; Belongs to the urease beta subunit family. (101 aa)
ureCPfam:pfam00449 Urease alpha-subunit, N-terminal domain. (572 aa)
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (263 aa)
rnhARibonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (158 aa)
ALV08188.1Dipeptidyl-peptidase 7; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (718 aa)
ALV08186.1Hypothetical protein; Pfam:pfam10459 Peptidase S46. (81 aa)
ALV08166.1TIGR00255 family protein; Pfam:pfam08340 Domain of unknown function (DUF1732). (300 aa)
rphRibonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (243 aa)
ALV08162.1Hypothetical protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (201 aa)
kynATryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. (300 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (432 aa)
kynBKynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. (209 aa)
ALV08131.1Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain. (410 aa)
ALV08114.1Glycogen debranching enzyme; Pfam:pfam02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Belongs to the glycosyl hydrolase 13 family. (711 aa)
ALV07596.1Chloroperoxidase; Pfam:pfam00857 Isochorismatase family. (217 aa)
ALV07598.1Amidohydrolase; Pfam:pfam07969 Amidohydrolase family. (630 aa)
ALV07599.1DoxX family protein; Pfam:pfam07681 DoxX. (145 aa)
ALV07164.1Pfam:pfam01266 FAD dependent oxidoreductase. (379 aa)
ALV07107.1Hypothetical protein. (181 aa)
ALV07104.1Pfam:pfam00498 FHA domain. (686 aa)
ALV04766.1Amino acid dehydrogenase; Pfam:pfam01266 FAD dependent oxidoreductase. (416 aa)
ALV07080.1Cellulase; Pfam:pfam00759 Glycosyl hydrolase family 9. (653 aa)
ALV07019.1Pfam:pfam01019 Gamma-glutamyltranspeptidase. (571 aa)
ALV07017.1Pfam:pfam12695 Alpha/beta hydrolase family. (293 aa)
ALV07015.1Hypothetical protein; Pfam:pfam12695 Alpha/beta hydrolase family. (290 aa)
ALV07011.1Pruvate-binding protein; Pfam:pfam13449 Esterase-like activity of phytase. (485 aa)
ALV07000.1Aldehyde-activating protein; Pfam:pfam04828 Glutathione-dependent formaldehyde-activating enzyme. (172 aa)
ALV06969.1Pfam:pfam01042 Endoribonuclease L-PSP. (128 aa)
ALV05520.1Pfam:pfam12697 Alpha/beta hydrolase family. (311 aa)
ALV05530.12-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase, putative; Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain. (317 aa)
rppHRNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. (216 aa)
ALV05644.1Hypothetical protein; Pfam:pfam07589 PEP-CTERM motif. (254 aa)
ALV05681.1Pfam:pfam12806 Acetyl-CoA dehydrogenase C-terminal like. (596 aa)
ALV05683.1Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. (798 aa)
ALV05707.1Putative zn-dependent hydrolase of the beta-lactamase fold protein; Pfam:pfam12706 Beta-lactamase superfamily domain. (406 aa)
ALV05729.1Hypothetical protein; Pfam:pfam03640 Secreted repeat of unknown function. (140 aa)
dtdD-aminoacyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa)
ALV05777.1Putative histidine triad (HIT) protein; Pfam:pfam11969 Scavenger mRNA decapping enzyme C-term binding. (115 aa)
ALV05784.1Pfam:pfam07793 Protein of unknown function (DUF1631). (837 aa)
ALV05815.1Xanthine dehydrogenase accessory protein XdhC; Pfam:pfam13478 XdhC Rossmann domain. (269 aa)
ALV04638.1Integrase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1196 aa)
ALV05850.1Beta-lactamase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. (343 aa)
ALV05882.1Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. (698 aa)
ALV05884.1Pfam:pfam12806 Acetyl-CoA dehydrogenase C-terminal like. (605 aa)
ALV05888.12-alkenal reductase; Pfam:pfam00107 Zinc-binding dehydrogenase. (339 aa)
ALV05894.1Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (555 aa)
ALV04650.1N-acyl homoserine lactonase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. (318 aa)
ALV05949.1Pfam:pfam12806 Acetyl-CoA dehydrogenase C-terminal like. (597 aa)
ALV05959.1Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (419 aa)
ALV05990.1D-amino-acid dehydrogenase; Pfam:pfam01266 FAD dependent oxidoreductase. (403 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (257 aa)
ALV04658.1Catalase; Pfam:pfam00199 Catalase. (497 aa)
ALV06025.1Beta-lactamase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. (317 aa)
ALV06026.1FAD-dependent oxidoreductase; Pfam:pfam01494 FAD binding domain. (605 aa)
ALV06028.1Pfam:pfam04209 homogentisate 1,2-dioxygenase. (445 aa)
ALV06029.1Fumarylacetoacetase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (448 aa)
ALV06045.1Pfam:pfam04958 Arginine N-succinyltransferase beta subunit. (386 aa)
ALV06046.1Hypothetical protein; Pfam:pfam04958 Arginine N-succinyltransferase beta subunit. (293 aa)
ALV06072.12-hydroxychromene-2-carboxylate isomerase; Pfam:pfam01323 DSBA-like thioredoxin domain. (200 aa)
ALV06089.1Hypothetical protein; Pfam:pfam04892 VanZ like family. (165 aa)
ALV06094.1Pfam:pfam00724 NADH:flavin oxidoreductase / NADH oxidase family. (367 aa)
ALV06103.1Hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family. (317 aa)
ALV06126.1Dienelactone hydrolase-like enzyme; Pfam:pfam01738 Dienelactone hydrolase family. (289 aa)
xseBExodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (94 aa)
ALV04670.1Chloroperoxidase; Pfam:pfam12697 Alpha/beta hydrolase family. (328 aa)
ALV06178.1Membrane protein; Pfam:pfam07681 DoxX. (183 aa)
ALV06241.1Hypothetical protein; Pfam:pfam13557 Putative MetA-pathway of phenol degradation. (336 aa)
ALV04686.1GTN reductase; Pfam:pfam00724 NADH:flavin oxidoreductase / NADH oxidase family. (358 aa)
ALV04687.1Pfam:pfam03473 MOSC domain. (189 aa)
ALV06322.1Putative hydrolase or acyltransferase of alpha/beta superfamily; Pfam:pfam12697 Alpha/beta hydrolase family. (324 aa)
ALV06369.1SlyX; Pfam:pfam04102 SlyX. (82 aa)
ALV06377.1Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (143 aa)
ALV06379.1Deoxyribose-phosphate aldolase DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. (258 aa)
ALV06382.1Phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (409 aa)
dutDeoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. (149 aa)
ALV06394.1Hypothetical protein. (498 aa)
ALV04710.1D-amino acid dehydrogenase; Pfam:pfam01266 FAD dependent oxidoreductase. (441 aa)
ALV06550.1Catalase; Pfam:pfam00199 Catalase. (892 aa)
surE5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (251 aa)
ALV04718.1Fumarylacetoacetase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (232 aa)
ALV06705.1Hypothetical protein. (484 aa)
ALV06851.1Cation transport protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. (225 aa)
eddPhosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (606 aa)
ALV06867.1Pfam:pfam04303 PrpF protein. (415 aa)
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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