(10 nodes) NUDIX hydrolase domain network (Roseateles depolymerans)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALV05773.1	Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. (178 aa)
	nudJ	Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family. NudJ subfamily. (163 aa)
	ALV08272.1	Pfam:pfam00293 NUDIX domain. (166 aa)
	ALV08144.1	Pfam:pfam00293 NUDIX domain. (244 aa)
	ALV08074.1	DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain. (242 aa)
	ALV07455.1	Hydrolase, NUDIX family; Pfam:pfam00293 NUDIX domain. (210 aa)
	ALV07410.1	Pfam:pfam00293 NUDIX domain. (239 aa)
	ALV07256.1	NADH pyrophosphatase; Pfam:pfam00293 NUDIX domain. (175 aa)
	ALV05833.1	ADP-ribose pyrophosphatase; Pfam:pfam14803 Nudix N-terminal; Belongs to the Nudix hydrolase family. (199 aa)
	rppH	RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. (216 aa)

Your Current Organism:

Roseateles depolymerans

NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALV05833.1	ALV07256.1	RD2015_1342	RD2015_2791	ADP-ribose pyrophosphatase; Pfam:pfam14803 Nudix N-terminal; Belongs to the Nudix hydrolase family.	NADH pyrophosphatase; Pfam:pfam00293 NUDIX domain.	0.717
ALV05833.1	ALV08074.1	RD2015_1342	RD2015_3619	ADP-ribose pyrophosphatase; Pfam:pfam14803 Nudix N-terminal; Belongs to the Nudix hydrolase family.	DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain.	0.408
ALV07256.1	ALV05833.1	RD2015_2791	RD2015_1342	NADH pyrophosphatase; Pfam:pfam00293 NUDIX domain.	ADP-ribose pyrophosphatase; Pfam:pfam14803 Nudix N-terminal; Belongs to the Nudix hydrolase family.	0.717
ALV08074.1	ALV05833.1	RD2015_3619	RD2015_1342	DNA mismatch repair protein MutT; Pfam:pfam00293 NUDIX domain.	ADP-ribose pyrophosphatase; Pfam:pfam14803 Nudix N-terminal; Belongs to the Nudix hydrolase family.	0.408