STRINGSTRING
ALV04858.1 ALV04858.1 ALV04608.1 ALV04608.1 ALV07173.1 ALV07173.1 ALV07451.1 ALV07451.1 ALV05338.1 ALV05338.1 ALV08920.1 ALV08920.1 ALV08424.1 ALV08424.1 ALV08413.1 ALV08413.1 murB murB ALV04859.1 ALV04859.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALV04858.1FAD linked oxidase; Pfam:pfam01565 FAD binding domain. (400 aa)
ALV04608.1Putative FAD-linked oxidoreductase; Pfam:pfam02913 FAD linked oxidases, C-terminal domain. (478 aa)
ALV07173.1Xanthine dehydrogenase; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase. (321 aa)
ALV07451.1D-2-hydroxyacid dehydrogenase; Pfam:pfam02913 FAD linked oxidases, C-terminal domain. (473 aa)
ALV05338.1Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase. (369 aa)
ALV08920.1Putative D-lactate dehydrogenase; Pfam:pfam01565 FAD binding domain. (469 aa)
ALV08424.1FAD-linked oxidase; Pfam:pfam12447 Protein of unknown function (DUF3683). (1304 aa)
ALV08413.1Xanthine dehydrogenase small subunit; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase. (525 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (356 aa)
ALV04859.1Glycolate oxidase subunit GlcD; Pfam:pfam02913 FAD linked oxidases, C-terminal domain. (500 aa)
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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