(6 nodes) [2Fe-2S] binding domain network (Roseateles depolymerans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALV05339.1	(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain. (222 aa)
	ALV07172.1	(2Fe-2S)-binding domain protein; Pfam:pfam01799 [2Fe-2S] binding domain. (289 aa)
	ALV08413.1	Xanthine dehydrogenase small subunit; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase. (525 aa)
	ALV08794.1	Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; Pfam:pfam01799 [2Fe-2S] binding domain. (158 aa)
	ALV09205.1	(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain. (159 aa)
	ALV09214.1	Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; Pfam:pfam01799 [2Fe-2S] binding domain. (167 aa)

Your Current Organism:

Roseateles depolymerans

NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALV05339.1	ALV07172.1	RD2015_843	RD2015_2707	(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain.	(2Fe-2S)-binding domain protein; Pfam:pfam01799 [2Fe-2S] binding domain.	0.908
ALV05339.1	ALV08413.1	RD2015_843	RD2015_3963	(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain.	Xanthine dehydrogenase small subunit; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.	0.927
ALV07172.1	ALV05339.1	RD2015_2707	RD2015_843	(2Fe-2S)-binding domain protein; Pfam:pfam01799 [2Fe-2S] binding domain.	(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain.	0.908
ALV07172.1	ALV08413.1	RD2015_2707	RD2015_3963	(2Fe-2S)-binding domain protein; Pfam:pfam01799 [2Fe-2S] binding domain.	Xanthine dehydrogenase small subunit; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.	0.926
ALV08413.1	ALV05339.1	RD2015_3963	RD2015_843	Xanthine dehydrogenase small subunit; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.	(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain.	0.927
ALV08413.1	ALV07172.1	RD2015_3963	RD2015_2707	Xanthine dehydrogenase small subunit; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.	(2Fe-2S)-binding domain protein; Pfam:pfam01799 [2Fe-2S] binding domain.	0.926