14 items (Aspergillus brasiliensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9UIY7	Small nuclear ribonucleoprotein G. (78 aa)
	A0A1L9UZW5	RRM domain-containing protein. (428 aa)
	A0A1L9V040	Uncharacterized protein. (85 aa)
	A0A1L9V064	Small nuclear ribonucleoprotein Sm D2. (115 aa)
	A0A1L9V1N0	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
	A0A1L9V229	Uncharacterized protein. (277 aa)
	A0A1L9UZV5	Uncharacterized protein. (1579 aa)
	A0A1L9USL6	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (204 aa)
	A0A1L9UQZ0	Uncharacterized protein. (797 aa)
	A0A1L9UKU1	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)
	A0A1L9UJF4	PWI domain-containing protein. (764 aa)
	A0A1L9V2F1	Uncharacterized protein. (573 aa)
	A0A1L9UHW6	Sm domain-containing protein. (220 aa)
	A0A1L9U4H4	Uncharacterized protein. (262 aa)

Your Current Organism:

Aspergillus brasiliensis

NCBI taxonomy Id: 767769
Other names: A. brasiliensis CBS 101740, Aspergillus brasiliensis CBS 101740

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9U4H4	A0A1L9UHW6	Uncharacterized protein.	Sm domain-containing protein.	0.912
A0A1L9U4H4	A0A1L9UIY7	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.991
A0A1L9U4H4	A0A1L9UJF4	Uncharacterized protein.	PWI domain-containing protein.	0.489
A0A1L9U4H4	A0A1L9UKU1	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.989
A0A1L9U4H4	A0A1L9UQZ0	Uncharacterized protein.	Uncharacterized protein.	0.673
A0A1L9U4H4	A0A1L9USL6	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.968
A0A1L9U4H4	A0A1L9UZV5	Uncharacterized protein.	Uncharacterized protein.	0.789
A0A1L9U4H4	A0A1L9UZW5	Uncharacterized protein.	RRM domain-containing protein.	0.953
A0A1L9U4H4	A0A1L9V064	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.990
A0A1L9U4H4	A0A1L9V1N0	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.988
A0A1L9U4H4	A0A1L9V229	Uncharacterized protein.	Uncharacterized protein.	0.729
A0A1L9U4H4	A0A1L9V2F1	Uncharacterized protein.	Uncharacterized protein.	0.495
A0A1L9UHW6	A0A1L9U4H4	Sm domain-containing protein.	Uncharacterized protein.	0.912
A0A1L9UHW6	A0A1L9UIY7	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.998
A0A1L9UHW6	A0A1L9UJF4	Sm domain-containing protein.	PWI domain-containing protein.	0.948
A0A1L9UHW6	A0A1L9UKU1	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A0A1L9UHW6	A0A1L9UQZ0	Sm domain-containing protein.	Uncharacterized protein.	0.824
A0A1L9UHW6	A0A1L9USL6	Sm domain-containing protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.993
A0A1L9UHW6	A0A1L9UZV5	Sm domain-containing protein.	Uncharacterized protein.	0.755
A0A1L9UHW6	A0A1L9UZW5	Sm domain-containing protein.	RRM domain-containing protein.	0.985