14 items (Aspergillus brasiliensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	A0A1L9V1N0	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
	A0A1L9USL6	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (204 aa)
	A0A1L9UZV5	Uncharacterized protein. (1579 aa)
	A0A1L9UZW5	RRM domain-containing protein. (428 aa)
	A0A1L9V040	Uncharacterized protein. (85 aa)
	A0A1L9V064	Small nuclear ribonucleoprotein Sm D2. (115 aa)
	A0A1L9UQZ0	Uncharacterized protein. (797 aa)
	A0A1L9V229	Uncharacterized protein. (277 aa)
	A0A1L9V2F1	Uncharacterized protein. (573 aa)
	A0A1L9U4H4	Uncharacterized protein. (262 aa)
	A0A1L9UHW6	Sm domain-containing protein. (220 aa)
	A0A1L9UIY7	Small nuclear ribonucleoprotein G. (78 aa)
	A0A1L9UJF4	PWI domain-containing protein. (764 aa)
	A0A1L9UKU1	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)

Your Current Organism:

Aspergillus brasiliensis

NCBI taxonomy Id: 767769
Other names: A. brasiliensis CBS 101740, Aspergillus brasiliensis CBS 101740

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9U4H4	A0A1L9UHW6	Uncharacterized protein.	Sm domain-containing protein.	0.912
A0A1L9U4H4	A0A1L9UIY7	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.991
A0A1L9U4H4	A0A1L9UJF4	Uncharacterized protein.	PWI domain-containing protein.	0.489
A0A1L9U4H4	A0A1L9UKU1	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.989
A0A1L9U4H4	A0A1L9UQZ0	Uncharacterized protein.	Uncharacterized protein.	0.673
A0A1L9U4H4	A0A1L9USL6	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.968
A0A1L9U4H4	A0A1L9UZV5	Uncharacterized protein.	Uncharacterized protein.	0.789
A0A1L9U4H4	A0A1L9UZW5	Uncharacterized protein.	RRM domain-containing protein.	0.953
A0A1L9U4H4	A0A1L9V064	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.990
A0A1L9U4H4	A0A1L9V1N0	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.988
A0A1L9U4H4	A0A1L9V229	Uncharacterized protein.	Uncharacterized protein.	0.729
A0A1L9U4H4	A0A1L9V2F1	Uncharacterized protein.	Uncharacterized protein.	0.495
A0A1L9UHW6	A0A1L9U4H4	Sm domain-containing protein.	Uncharacterized protein.	0.912
A0A1L9UHW6	A0A1L9UIY7	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.998
A0A1L9UHW6	A0A1L9UJF4	Sm domain-containing protein.	PWI domain-containing protein.	0.948
A0A1L9UHW6	A0A1L9UKU1	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A0A1L9UHW6	A0A1L9UQZ0	Sm domain-containing protein.	Uncharacterized protein.	0.824
A0A1L9UHW6	A0A1L9USL6	Sm domain-containing protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.993
A0A1L9UHW6	A0A1L9UZV5	Sm domain-containing protein.	Uncharacterized protein.	0.755
A0A1L9UHW6	A0A1L9UZW5	Sm domain-containing protein.	RRM domain-containing protein.	0.985