(12 nodes) Preribosome, small subunit precursor network (Aspergillus brasiliensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9UZM3	Uncharacterized protein. (720 aa)
	A0A1L9UAI6	Uncharacterized protein. (493 aa)
	A0A1L9UFN0	RIO domain-containing protein. (403 aa)
	A0A1L9UID2	RRM domain-containing protein. (467 aa)
	A0A1L9UIL6	Uncharacterized protein. (919 aa)
	A0A1L9UJ18	CBF domain-containing protein. (549 aa)
	A0A1L9UMM8	Uncharacterized protein. (316 aa)
	A0A1L9UQC1	Uncharacterized protein. (327 aa)
	A0A1L9UT26	Uncharacterized protein. (171 aa)
	A0A1L9UUT5	Uncharacterized protein. (493 aa)
	A0A1L9UY59	Bms1-type G domain-containing protein. (802 aa)
	A0A1L9V103	DRIM domain-containing protein. (2611 aa)

Your Current Organism:

Aspergillus brasiliensis

NCBI taxonomy Id: 767769
Other names: A. brasiliensis CBS 101740, Aspergillus brasiliensis CBS 101740

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9UAI6	A0A1L9UFN0	Uncharacterized protein.	RIO domain-containing protein.	0.999
A0A1L9UAI6	A0A1L9UID2	Uncharacterized protein.	RRM domain-containing protein.	0.873
A0A1L9UAI6	A0A1L9UIL6	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A1L9UAI6	A0A1L9UJ18	Uncharacterized protein.	CBF domain-containing protein.	0.859
A0A1L9UAI6	A0A1L9UQC1	Uncharacterized protein.	Uncharacterized protein.	0.771
A0A1L9UAI6	A0A1L9UUT5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1L9UAI6	A0A1L9UY59	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.999
A0A1L9UAI6	A0A1L9V103	Uncharacterized protein.	DRIM domain-containing protein.	0.555
A0A1L9UFN0	A0A1L9UAI6	RIO domain-containing protein.	Uncharacterized protein.	0.999
A0A1L9UFN0	A0A1L9UID2	RIO domain-containing protein.	RRM domain-containing protein.	0.756
A0A1L9UFN0	A0A1L9UIL6	RIO domain-containing protein.	Uncharacterized protein.	0.850
A0A1L9UFN0	A0A1L9UJ18	RIO domain-containing protein.	CBF domain-containing protein.	0.703
A0A1L9UFN0	A0A1L9UQC1	RIO domain-containing protein.	Uncharacterized protein.	0.586
A0A1L9UFN0	A0A1L9UUT5	RIO domain-containing protein.	Uncharacterized protein.	0.995
A0A1L9UFN0	A0A1L9UY59	RIO domain-containing protein.	Bms1-type G domain-containing protein.	0.997
A0A1L9UFN0	A0A1L9UZM3	RIO domain-containing protein.	Uncharacterized protein.	0.400
A0A1L9UID2	A0A1L9UAI6	RRM domain-containing protein.	Uncharacterized protein.	0.873
A0A1L9UID2	A0A1L9UFN0	RRM domain-containing protein.	RIO domain-containing protein.	0.756
A0A1L9UID2	A0A1L9UIL6	RRM domain-containing protein.	Uncharacterized protein.	0.899
A0A1L9UID2	A0A1L9UJ18	RRM domain-containing protein.	CBF domain-containing protein.	0.874