7 items (Aspergillus tubingensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9N449	Uncharacterized protein. (355 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (121 aa)
	A0A1L9MYA0	Uncharacterized protein. (1303 aa)
	A0A1L9N6W0	Sm domain-containing protein. (89 aa)
	A0A1L9NN00	Sm domain-containing protein. (79 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)

Your Current Organism:

Aspergillus tubingensis

NCBI taxonomy Id: 767770
Other names: A. tubingensis CBS 134.48, Aspergillus tubingensis CBS 134.48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L9MYA0	A0A1L9N449	A0A1L9MYA0	A0A1L9N449	Uncharacterized protein.	Uncharacterized protein.	0.983
A0A1L9MYA0	A0A1L9N6W0	A0A1L9MYA0	A0A1L9N6W0	Uncharacterized protein.	Sm domain-containing protein.	0.983
A0A1L9MYA0	A0A1L9NN00	A0A1L9MYA0	A0A1L9NN00	Uncharacterized protein.	Sm domain-containing protein.	0.981
A0A1L9MYA0	LSM4	A0A1L9MYA0	A0A1L9NAI1	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.983
A0A1L9MYA0	LSM5	A0A1L9MYA0	A0A1L9NEA6	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.983
A0A1L9MYA0	LSM8	A0A1L9MYA0	A0A1L9NP27	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.984
A0A1L9N449	A0A1L9MYA0	A0A1L9N449	A0A1L9MYA0	Uncharacterized protein.	Uncharacterized protein.	0.983
A0A1L9N449	A0A1L9N6W0	A0A1L9N449	A0A1L9N6W0	Uncharacterized protein.	Sm domain-containing protein.	0.999
A0A1L9N449	A0A1L9NN00	A0A1L9N449	A0A1L9NN00	Uncharacterized protein.	Sm domain-containing protein.	0.999
A0A1L9N449	LSM4	A0A1L9N449	A0A1L9NAI1	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A1L9N449	LSM5	A0A1L9N449	A0A1L9NEA6	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
A0A1L9N449	LSM8	A0A1L9N449	A0A1L9NP27	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
A0A1L9N6W0	A0A1L9MYA0	A0A1L9N6W0	A0A1L9MYA0	Sm domain-containing protein.	Uncharacterized protein.	0.983
A0A1L9N6W0	A0A1L9N449	A0A1L9N6W0	A0A1L9N449	Sm domain-containing protein.	Uncharacterized protein.	0.999
A0A1L9N6W0	A0A1L9NN00	A0A1L9N6W0	A0A1L9NN00	Sm domain-containing protein.	Sm domain-containing protein.	0.999
A0A1L9N6W0	LSM4	A0A1L9N6W0	A0A1L9NAI1	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A1L9N6W0	LSM5	A0A1L9N6W0	A0A1L9NEA6	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
A0A1L9N6W0	LSM8	A0A1L9N6W0	A0A1L9NP27	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.997
A0A1L9NN00	A0A1L9MYA0	A0A1L9NN00	A0A1L9MYA0	Sm domain-containing protein.	Uncharacterized protein.	0.981
A0A1L9NN00	A0A1L9N449	A0A1L9NN00	A0A1L9N449	Sm domain-containing protein.	Uncharacterized protein.	0.999