STRINGSTRING
AGK99639.1 AGK99639.1 AGK99640.1 AGK99640.1 AGL00351.1 AGL00351.1 AGL00660.1 AGL00660.1 AGL00753.1 AGL00753.1 AGL00782.1 AGL00782.1 fni fni AGL01408.1 AGL01408.1 AGL01739.1 AGL01739.1 AGL02283.1 AGL02283.1 AGL02284.1 AGL02284.1 AGL02285.1 AGL02285.1 AGL02286.1 AGL02286.1 AGL02287.1 AGL02287.1 AGL03014.1 AGL03014.1 AGL03307.1 AGL03307.1 AGL03464.1 AGL03464.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGK99639.1Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; PFAM: Aminotransferase class-V. (381 aa)
AGK99640.1PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase. (529 aa)
AGL00351.1Hypothetical protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: ybaK/ebsC protein. (395 aa)
AGL00660.1Acyl dehydratase; PFAM: MaoC like domain. (151 aa)
AGL00753.1Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin. (324 aa)
AGL00782.1glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase. (391 aa)
fniIsopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (345 aa)
AGL01408.1Methyltransferase family protein; PFAM: Methyltransferase domain. (249 aa)
AGL01739.1PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family. (383 aa)
AGL02283.1Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP. (133 aa)
AGL02284.1glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase. (373 aa)
AGL02285.1NAD(P)H-nitrite reductase; PFAM: BFD-like [2Fe-2S] binding domain. (116 aa)
AGL02286.1Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (530 aa)
AGL02287.1Hypothetical protein. (107 aa)
AGL03014.1PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family. (385 aa)
AGL03307.1Hypothetical protein. (112 aa)
AGL03464.1L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (584 aa)
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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