STRINGSTRING
AGL00409.1 AGL00409.1 AGL01115.1 AGL01115.1 AGL01303.1 AGL01303.1 AGL02936.1 AGL02936.1 AGL03586.1 AGL03586.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGL00409.1Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein. (107 aa)
AGL01115.1PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB. (250 aa)
AGL01303.1Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase; TIGRFAM: probable sporulation protein, polysaccharide deacetylase family. (246 aa)
AGL02936.1Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase. (341 aa)
AGL03586.1Hypothetical protein. (154 aa)
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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