STRINGSTRING
AGL00343.1 AGL00343.1 AGL00345.1 AGL00345.1 AGL00347.1 AGL00347.1 AGL00687.1 AGL00687.1 AGL01082.1 AGL01082.1 AGL01083.1 AGL01083.1 AGL01084.1 AGL01084.1 AGL01485.1 AGL01485.1 AGL01486.1 AGL01486.1 AGL01487.1 AGL01487.1 AGL01595.1 AGL01595.1 AGL01596.1 AGL01596.1 AGL01597.1 AGL01597.1 AGL03019.1 AGL03019.1 AGL03020.1 AGL03020.1 AGL03021.1 AGL03021.1 AGL03022.1 AGL03022.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGL00343.1PFAM: Methyl-viologen-reducing hydrogenase, delta subunit. (147 aa)
AGL00345.1PFAM: FAD binding domain. (576 aa)
AGL00347.1Hypothetical protein. (100 aa)
AGL00687.1PFAM: Methyl-viologen-reducing hydrogenase, delta subunit. (145 aa)
AGL01082.1Heterodisulfide reductase, subunit C. (194 aa)
AGL01083.1Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain. (285 aa)
AGL01084.1Polyferredoxin, heterodixulfide reductase subunit A; PFAM: FAD dependent oxidoreductase. (660 aa)
AGL01485.1PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus. (318 aa)
AGL01486.1PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Contains selenocysteine; manually curated. (146 aa)
AGL01487.1Polyferredoxin, heterodixulfide reductase subunit A; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain; 4Fe-4S binding domain. (1008 aa)
AGL01595.1PFAM: FAD binding domain; 4Fe-4S binding domain. (1021 aa)
AGL01596.1Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain. (284 aa)
AGL01597.1Hypothetical protein. (179 aa)
AGL03019.1Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain. (293 aa)
AGL03020.1Heterodisulfide reductase, subunit C. (200 aa)
AGL03021.1PFAM: Pyridine nucleotide-disulphide oxidoreductase; Methyl-viologen-reducing hydrogenase, delta subunit. (735 aa)
AGL03022.1PFAM: FAD binding domain. (418 aa)
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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