STRINGSTRING
AGL01485.1 AGL01485.1 AGL01486.1 AGL01486.1 AGL01487.1 AGL01487.1 AGL03019.1 AGL03019.1 AGL03020.1 AGL03020.1 AGL03021.1 AGL03021.1 AGL03022.1 AGL03022.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGL01485.1PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus. (318 aa)
AGL01486.1PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Contains selenocysteine; manually curated. (146 aa)
AGL01487.1Polyferredoxin, heterodixulfide reductase subunit A; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain; 4Fe-4S binding domain. (1008 aa)
AGL03019.1Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain. (293 aa)
AGL03020.1Heterodisulfide reductase, subunit C. (200 aa)
AGL03021.1PFAM: Pyridine nucleotide-disulphide oxidoreductase; Methyl-viologen-reducing hydrogenase, delta subunit. (735 aa)
AGL03022.1PFAM: FAD binding domain. (418 aa)
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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