STRINGSTRING
AGL00750.1 AGL00750.1 AGL00751.1 AGL00751.1 AGL00896.1 AGL00896.1 AGL00897.1 AGL00897.1 AGL00902.1 AGL00902.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGL00750.1Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA). (322 aa)
AGL00751.1Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase. (464 aa)
AGL00896.1Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA). (376 aa)
AGL00897.1Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase. (478 aa)
AGL00902.1PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease. (156 aa)
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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