31 items (Desulfallas gibsoniae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGK99668.1	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (84 aa)
	AGK99669.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family. (110 aa)
	AGK99784.1	Hypothetical protein. (124 aa)
	AGK99785.1	Hypothetical protein. (96 aa)
	AGL00106.1	Antitoxin of toxin-antitoxin stability system; Antitoxin component of a type II toxin-antitoxin (TA) system. (70 aa)
	AGL00353.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family. (108 aa)
	AGL00354.1	Phd_YefM; Antitoxin component of a type II toxin-antitoxin (TA) system. (96 aa)
	AGL00382.1	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family. (89 aa)
	AGL00383.1	Hypothetical protein; PFAM: Plasmid encoded toxin Txe. (37 aa)
	AGL00732.1	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family. (91 aa)
	AGL00733.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family. (88 aa)
	AGL01689.1	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family. (91 aa)
	AGL01690.1	Addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family. (93 aa)
	AGL02295.1	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (90 aa)
	AGL02437.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family. (101 aa)
	AGL02438.1	Phd_YefM; Antitoxin component of a type II toxin-antitoxin (TA) system. (91 aa)
	AGL02513.1	Hypothetical protein. (86 aa)
	AGL02514.1	Hypothetical protein. (94 aa)
	AGL02796.1	PFAM: Plasmid stabilisation system protein. (105 aa)
	AGL02797.1	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (103 aa)
	AGL03179.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family. (95 aa)
	AGL03180.1	Hypothetical protein. (73 aa)
	AGL03491.1	Hypothetical protein. (103 aa)
	AGL03492.1	PFAM: Plasmid stabilisation system protein. (107 aa)
	AGL03493.1	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (90 aa)
	AGL03636.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family. (90 aa)
	AGL03637.1	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family. (91 aa)
	AGL03646.1	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family. (103 aa)
	AGL03647.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family. (109 aa)
	AGL03660.1	Phd_YefM; Antitoxin component of a type II toxin-antitoxin (TA) system. (88 aa)
	AGL03661.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family. (106 aa)

Your Current Organism:

Desulfallas gibsoniae

NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGK99668.1	AGK99669.1	Desgi_0049	Desgi_0050	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	0.950
AGK99668.1	AGK99785.1	Desgi_0049	Desgi_0172	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Hypothetical protein.	0.553
AGK99668.1	AGL00106.1	Desgi_0049	Desgi_0541	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Antitoxin of toxin-antitoxin stability system; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.750
AGK99668.1	AGL00353.1	Desgi_0049	Desgi_0801	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	0.682
AGK99668.1	AGL00354.1	Desgi_0049	Desgi_0802	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Phd_YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.750
AGK99668.1	AGL00383.1	Desgi_0049	Desgi_0832	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Hypothetical protein; PFAM: Plasmid encoded toxin Txe.	0.616
AGK99668.1	AGL02437.1	Desgi_0049	Desgi_3059	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	0.770
AGK99668.1	AGL02513.1	Desgi_0049	Desgi_3158	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Hypothetical protein.	0.442
AGK99668.1	AGL02797.1	Desgi_0049	Desgi_3462	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.757
AGK99668.1	AGL03179.1	Desgi_0049	Desgi_3871	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	0.442
AGK99668.1	AGL03493.1	Desgi_0049	Desgi_4243	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.761
AGK99668.1	AGL03647.1	Desgi_0049	Desgi_4406	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	0.583
AGK99668.1	AGL03661.1	Desgi_0049	Desgi_4422	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	0.770
AGK99669.1	AGK99668.1	Desgi_0050	Desgi_0049	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.950
AGK99669.1	AGL00106.1	Desgi_0050	Desgi_0541	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	Antitoxin of toxin-antitoxin stability system; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.738
AGK99669.1	AGL00354.1	Desgi_0050	Desgi_0802	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	Phd_YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.746
AGK99669.1	AGL00382.1	Desgi_0050	Desgi_0831	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family.	0.422
AGK99669.1	AGL00732.1	Desgi_0050	Desgi_1209	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family.	0.422
AGK99669.1	AGL01689.1	Desgi_0050	Desgi_2265	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family.	0.422
AGK99669.1	AGL02295.1	Desgi_0050	Desgi_2896	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.770

page 1 of 18

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2025

Credits

Access

Info

About