STRINGSTRING
AGL00253.1 AGL00253.1 AGL00341.1 AGL00341.1 AGL00539.1 AGL00539.1 AGL02318.1 AGL02318.1 AGL02415.1 AGL02415.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGL00253.1Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase. (384 aa)
AGL00341.1Hypothetical protein; PFAM: Uncharacterised BCR, COG1937. (141 aa)
AGL00539.1Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase. (388 aa)
AGL02318.1Zn-dependent alcohol dehydrogenase, class III; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase. (365 aa)
AGL02415.1Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase. (387 aa)
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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