STRINGSTRING
AGK99645.1 AGK99645.1 AGK99785.1 AGK99785.1 AGK99812.1 AGK99812.1 AGL00133.1 AGL00133.1 AGL00135.1 AGL00135.1 AGL00284.1 AGL00284.1 AGL00521.1 AGL00521.1 AGL00573.1 AGL00573.1 AGL00681.1 AGL00681.1 AGL00861.1 AGL00861.1 dnaG dnaG AGL00977.1 AGL00977.1 AGL01047.1 AGL01047.1 AGL01104.1 AGL01104.1 AGL01118.1 AGL01118.1 lexA lexA AGL01195.1 AGL01195.1 lexA-2 lexA-2 AGL01471.1 AGL01471.1 AGL01472.1 AGL01472.1 AGL01522.1 AGL01522.1 AGL01724.1 AGL01724.1 AGL01738.1 AGL01738.1 AGL01754.1 AGL01754.1 AGL01775.1 AGL01775.1 AGL01808.1 AGL01808.1 AGL01896.1 AGL01896.1 AGL02092.1 AGL02092.1 priA priA AGL02251.1 AGL02251.1 AGL02327.1 AGL02327.1 AGL02369.1 AGL02369.1 AGL02403.1 AGL02403.1 AGL02476.1 AGL02476.1 AGL02513.1 AGL02513.1 AGL02577.1 AGL02577.1 AGL02588.1 AGL02588.1 AGL02722.1 AGL02722.1 AGL02801.1 AGL02801.1 AGL02863.1 AGL02863.1 AGL02921.1 AGL02921.1 AGL02949.1 AGL02949.1 AGL02994.1 AGL02994.1 AGL03179.1 AGL03179.1 AGL03224.1 AGL03224.1 AGL03507.1 AGL03507.1 AGL03523.1 AGL03523.1 AGL03960.1 AGL03960.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGK99645.1DNA primase; PFAM: CHC2 zinc finger. (206 aa)
AGK99785.1Hypothetical protein. (96 aa)
AGK99812.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (255 aa)
AGL00133.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (225 aa)
AGL00135.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (219 aa)
AGL00284.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (231 aa)
AGL00521.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (242 aa)
AGL00573.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (238 aa)
AGL00681.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (311 aa)
AGL00861.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (222 aa)
dnaGDNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (619 aa)
AGL00977.1DNA replication protein; PFAM: IstB-like ATP binding protein. (227 aa)
AGL01047.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (231 aa)
AGL01104.1DNA replication protein; PFAM: IstB-like ATP binding protein. (255 aa)
AGL01118.1Hypothetical protein. (332 aa)
lexASOS regulatory protein LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (204 aa)
AGL01195.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (232 aa)
lexA-2SOS regulatory protein LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (204 aa)
AGL01471.1DNA replication protein; PFAM: IstB-like ATP binding protein. (245 aa)
AGL01472.1DnaD-like protein; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain. (270 aa)
AGL01522.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (227 aa)
AGL01724.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (239 aa)
AGL01738.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (225 aa)
AGL01754.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (236 aa)
AGL01775.1Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain; PFAM: Ribbon-helix-helix protein, copG family. (92 aa)
AGL01808.1ATP-dependent DNA helicase RecQ; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family. (601 aa)
AGL01896.1DNA replication protein; PFAM: IstB-like ATP binding protein. (255 aa)
AGL02092.1PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA). (442 aa)
priAPrimosomal protein N'; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (746 aa)
AGL02251.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (237 aa)
AGL02327.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (232 aa)
AGL02369.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (230 aa)
AGL02403.1DNA replication protein; PFAM: IstB-like ATP binding protein. (258 aa)
AGL02476.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (237 aa)
AGL02513.1Hypothetical protein. (86 aa)
AGL02577.1Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. (128 aa)
AGL02588.1Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. (110 aa)
AGL02722.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (226 aa)
AGL02801.1DNA replication protein; PFAM: IstB-like ATP binding protein; manually curated. (255 aa)
AGL02863.1Hypothetical protein. (477 aa)
AGL02921.1PFAM: HhH-GPD superfamily base excision DNA repair protein. (205 aa)
AGL02949.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB. (240 aa)
AGL02994.1Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family. (151 aa)
AGL03179.1PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family. (95 aa)
AGL03224.1DNA replication protein; PFAM: IstB-like ATP binding protein. (245 aa)
AGL03507.1PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (225 aa)
AGL03523.1PFAM: Protein of unknown function (DUF1044); manually curated. (113 aa)
AGL03960.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (445 aa)
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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