STRINGSTRING
AGL00050.1 AGL00050.1 AGL00078.1 AGL00078.1 AGL00079.1 AGL00079.1 AGL00085.1 AGL00085.1 AGL00196.1 AGL00196.1 AGL00197.1 AGL00197.1 AGL00201.1 AGL00201.1 AGL00202.1 AGL00202.1 AGL00203.1 AGL00203.1 AGL00214.1 AGL00214.1 AGL00215.1 AGL00215.1 AGL00226.1 AGL00226.1 AGL00253.1 AGL00253.1 AGL00446.1 AGL00446.1 AGL00539.1 AGL00539.1 AGL00552.1 AGL00552.1 AGL00927.1 AGL00927.1 AGL00928.1 AGL00928.1 AGL00982.1 AGL00982.1 AGL01412.1 AGL01412.1 AGL01413.1 AGL01413.1 AGL01414.1 AGL01414.1 AGL01415.1 AGL01415.1 ubiX ubiX AGL02048.1 AGL02048.1 AGL02318.1 AGL02318.1 AGL02415.1 AGL02415.1 ubiX-2 ubiX-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGL00050.1Fe-S-cluster-containing hydrogenase subunit. (177 aa)
AGL00078.1benzoyl-CoA reductase, bzd-type, N subunit; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; TIGRFAM: benzoyl-CoA reductase, bzd-type, N subunit. (370 aa)
AGL00079.1benzoyl-CoA reductase, bzd-type, O subunit; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; TIGRFAM: benzoyl-CoA reductase, bzd-type, O subunit. (437 aa)
AGL00085.1Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase. (383 aa)
AGL00196.1Putative nucleic-acid-binding protein containing a Zn-ribbon; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain. (139 aa)
AGL00197.1acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (386 aa)
AGL00201.1Putative acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family. (406 aa)
AGL00202.1PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain. (401 aa)
AGL00203.1enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family. (255 aa)
AGL00214.1Pyruvate-formate lyase; PFAM: Glycine radical; Pyruvate formate lyase. (866 aa)
AGL00215.1Hypothetical protein. (79 aa)
AGL00226.1enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family. (255 aa)
AGL00253.1Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase. (384 aa)
AGL00446.1Alcohol dehydrogenase, class IV; PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (872 aa)
AGL00539.1Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase. (388 aa)
AGL00552.1Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold. (263 aa)
AGL00927.1PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative. (257 aa)
AGL00928.1benzoyl-CoA reductase, bzd-type, Q subunit; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; benzoyl-CoA reductase, bzd-type, Q subunit. (292 aa)
AGL00982.1Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase. (390 aa)
AGL01412.1PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. (376 aa)
AGL01413.1enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: cyclohexa-1,5-dienecarbonyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (254 aa)
AGL01414.1PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. (359 aa)
AGL01415.1PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3. (666 aa)
ubiXPolyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (185 aa)
AGL02048.1PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme. (63 aa)
AGL02318.1Zn-dependent alcohol dehydrogenase, class III; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase. (365 aa)
AGL02415.1Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase. (387 aa)
ubiX-2Polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (189 aa)
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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