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| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (445 aa) |
| | AGK99694.1 | Succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: domain; FAD binding domain. (577 aa) |
| | AGK99792.1 | PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (532 aa) |
| | AGK99793.1 | PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (540 aa) |
| | AGK99797.1 | PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (571 aa) |
| | AGK99812.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (255 aa) |
| | AGL00037.1 | acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa) |
| | AGL00041.1 | acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa) |
| | AGL00070.1 | acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa) |
| | AGL00134.1 | PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (440 aa) |
| | AGL00135.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (219 aa) |
| | AGL00186.1 | PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (812 aa) |
| | AGL00248.1 | TRAP-type C4-dicarboxylate transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family. (352 aa) |
| | AGL00250.1 | PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit. (432 aa) |
| | AGL00265.1 | Subtilisin-like serine protease; PFAM: Subtilase family; Belongs to the peptidase S8 family. (478 aa) |
| | AGL00271.1 | PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (350 aa) |
| | AGL00406.1 | PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (112 aa) |
| | AGL00408.1 | PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; manually curated; non-canonical start codon. (442 aa) |
| | AGL00485.1 | PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (572 aa) |
| | AGL00486.1 | Hypothetical protein. (43 aa) |
| | AGL00487.1 | Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B. (208 aa) |
| | AGL00521.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (242 aa) |
| | AGL00522.1 | PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (661 aa) |
| | AGL00525.1 | PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (112 aa) |
| | AGL00533.1 | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (255 aa) |
| | AGL00540.1 | PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (429 aa) |
| | AGL00626.1 | PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats. (622 aa) |
| | AGL00655.1 | PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (355 aa) |
| | AGL00674.1 | acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa) |
| | AGL00681.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (311 aa) |
| | AGL00697.1 | PFAM: Copper amine oxidase N-terminal domain; D-alanyl-D-alanine carboxypeptidase. (330 aa) |
| | AGL00704.1 | PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain. (480 aa) |
| | AGL00750.1 | Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA). (322 aa) |
| | AGL00751.1 | Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase. (464 aa) |
| | AGL00792.1 | PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (237 aa) |
| | AGL00793.1 | cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain. (220 aa) |
| | AGL00804.1 | PFAM: HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family. (287 aa) |
| | AGL00861.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (222 aa) |
| | AGL00862.1 | PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (445 aa) |
| | AGL00896.1 | Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA). (376 aa) |
| | AGL00897.1 | Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase. (478 aa) |
| | AGL00906.1 | PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (224 aa) |
| | AGL00907.1 | Histidine kinase,GAF domain-containing protein; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain. (560 aa) |
| | AGL00937.1 | PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (226 aa) |
| | AGL00942.1 | Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (450 aa) |
| | AGL00943.1 | PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (518 aa) |
| | AGL00994.1 | cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain. (216 aa) |
| | AGL01002.1 | Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B. (200 aa) |
| | AGL01004.1 | Response regulator of citrate/malate metabolism; PFAM: HAMP domain. (391 aa) |
| | AGL01022.1 | Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B. (222 aa) |
| | AGL01047.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (231 aa) |
| | AGL01048.1 | PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold. (594 aa) |
| | AGL01053.1 | Phosphate binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein. (303 aa) |
| | AGL01080.1 | PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (816 aa) |
| | AGL01195.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (232 aa) |
| | AGL01196.1 | PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (377 aa) |
| | ddl | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (351 aa) |
| | AGL01208.1 | Alanine racemase; PFAM: Acyltransferase family; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase. (571 aa) |
| | AGL01371.1 | acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa) |
| | AGL01410.1 | acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (384 aa) |
| | AGL01628.1 | PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (520 aa) |
| | AGL01632.1 | PFAM: Response regulator receiver domain. (121 aa) |
| | AGL01634.1 | Methylase of chemotaxis methyl-accepting protein; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain. (257 aa) |
| | AGL01638.1 | PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family. (267 aa) |
| | AGL01671.1 | PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (511 aa) |
| | AGL01697.1 | Flagellin/flagellar hook associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (555 aa) |
| | csrA | Carbon storage regulator CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (77 aa) |
| | AGL01704.1 | PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM. (96 aa) |
| | cheB | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (360 aa) |
| | AGL01706.1 | Chemotaxis protein histidine kinase-like protein; PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain. (707 aa) |
| | AGL01707.1 | Chemotaxis signal transduction protein; PFAM: CheW-like domain. (158 aa) |
| | AGL01708.1 | Flagellar motor component; PFAM: MotA/TolQ/ExbB proton channel family. (261 aa) |
| | AGL01710.1 | Chemotaxis signal transduction protein; PFAM: CheW-like domain. (139 aa) |
| | AGL01738.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (225 aa) |
| | AGL01739.1 | PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family. (383 aa) |
| | AGL01754.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (236 aa) |
| | AGL01771.1 | Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain. (135 aa) |
| | AGL01777.1 | PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I. (443 aa) |
| | AGL01794.1 | PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I. (440 aa) |
| | AGL01889.1 | Signal transduction histidine kinase, nitrogen specific; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (606 aa) |
| | AGL01890.1 | Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain. (232 aa) |
| | AGL01892.1 | Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B. (200 aa) |
| | AGL02000.1 | Sporulation transcription factor Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (253 aa) |
| | AGL02120.1 | PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (225 aa) |
| | AGL02172.1 | PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (639 aa) |
| | AGL02174.1 | PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (527 aa) |
| | AGL02291.1 | PFAM: Glutamine synthetase, catalytic domain. (465 aa) |
| | AGL02327.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (232 aa) |
| | AGL02328.1 | Histidine kinase,HAMP domain-containing protein,histidine kinase,cache domain-containing protein; PFAM: Cache domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (757 aa) |
| | AGL02368.1 | PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365). (591 aa) |
| | AGL02395.1 | PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (447 aa) |
| | AGL02398.1 | Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B. (213 aa) |
| | AGL02476.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (237 aa) |
| | AGL02484.1 | Putative vancomycin resistance protein; PFAM: VanW like protein. (278 aa) |
| | AGL02635.1 | Hypothetical protein. (165 aa) |
| | AGL02656.1 | PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (374 aa) |
| | AGL02677.1 | acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa) |
| | AGL02722.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (226 aa) |
| | AGL02948.1 | Phosphate regulon sensor kinase PhoR; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; phosphate regulon sensor kinase PhoR. (459 aa) |
| | AGL02949.1 | PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB. (240 aa) |
| | AGL03014.1 | PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family. (385 aa) |
| | AGL03164.1 | PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (400 aa) |
| | AGL03205.1 | PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; ACT domain; manually curated. (470 aa) |
| | AGL03275.1 | PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit. (210 aa) |
| | AGL03276.1 | PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup. (607 aa) |
| | AGL03277.1 | TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (253 aa) |
| | AGL03279.1 | cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain. (230 aa) |
| | AGL03297.1 | acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa) |
| | AGL03337.1 | PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (223 aa) |
| | AGL03425.1 | PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (533 aa) |
| | AGL03426.1 | PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (626 aa) |
| | AGL03508.1 | PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (411 aa) |
| | AGL03519.1 | PFAM: Alkaline phosphatase; Belongs to the alkaline phosphatase family. (455 aa) |
| | AGL03544.1 | PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor. (468 aa) |
| | AGL03838.1 | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (389 aa) |
| | AGL03843.1 | Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase. (155 aa) |
| | AGL03860.1 | Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain. (134 aa) |
| | AGL03877.1 | PFAM: Nitrate reductase gamma subunit. (274 aa) |
| | AGL03899.1 | acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa) |
