STRINGSTRING
tesB tesB cumB cumB soj soj nce nce recR recR recR-2 recR-2 ycgL ycgL HELO_2060 HELO_2060 HELO_2293 HELO_2293 hda hda HELO_2665 HELO_2665 ftsK ftsK fimX fimX parB parB parA parA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tesBAcyl-CoA thioesterase 2 - Haemophilus influenzae,InterPro: Acyl-CoA thioesterase, High confidence in function and specificity. (273 aa)
cumBCMP/dCMP deaminase, zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (155 aa)
sojCobyrinic acid a,c-diamide synthase; Sporulation initiation inhibitor protein soj -Bacillus subtilis,InterPro: ATPase ParA type, High confidence in function and specificity. (244 aa)
nceNa+/Ca2+-exchanging protein; Vacuolar cation/proton exchanger 5 - Arabidopsis thaliana (Mouse-ear cress),InterPro: Sodium/calcium exchanger membrane region, High confidence in function and specificity. (343 aa)
recRK09747 hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (123 aa)
recR-2Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (201 aa)
ycgLK09902 hypothetical protein; Uncharacterized protein HI1446 - Haemophilus influenzae,InterPro: Protein of unknown function DUF709,High confidence in function and specificity. (100 aa)
HELO_2060K09160 hypothetical protein; UPF0260 protein blr3103 - Bradyrhizobium japonicum,InterPro: Uncharacterised conserved protein UCP006173, High confidence in function and specificity; Belongs to the UPF0260 family. (148 aa)
HELO_2293Conserved hypothetical protein. (359 aa)
hdaK10763 DnaA-homolog protein; Chromosomal replication initiator protein dnaA -Escherichia coli O139:H28 (strain E24377A / ETEC), High confidence in function and specificity; Belongs to the DnaA family. HdA subfamily. (233 aa)
HELO_2665Phage integrase family protein; Tyrosine recombinase xerD - Proteus mirabilis,InterPro: Phage integrase, Specificity unclear; Belongs to the 'phage' integrase family. (342 aa)
ftsKK03466 DNA segregation ATPase FtsK/SpoIIIE,S-DNA-T family; DNA translocase ftsK - Vibrio parahaemolyticus,InterPro: Cell divisionFtsK/SpoIIIE protein, High confidence in function and specificity. (1072 aa)
fimXK07357 type 1 fimbriae regulatory protein FimB; Tyrosine recombinase xerD - Bacillus halodurans,InterPro: Phage integrase, High confidence in function and specificity. (208 aa)
parBProbable chromosome-partitioning protein parB -Pseudomonas putida (strain KT2440),InterPro: ParB-like partition protein, High confidence in function and specificity; Belongs to the ParB family. (308 aa)
parAK03496 chromosome partitioning protein; Uncharacterized protein PP_0002 - Pseudomonas putida (strain KT2440),InterPro: ATPase ParA type, High confidence in function and specificity. (256 aa)
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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