Your Input: | |
| | ALM94547.1 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa) |
| | ALM93059.1 | Helicase SNF; Derived by automated computational analysis using gene prediction method: Protein Homology. (899 aa) |
| | ALM93068.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa) |
| | ALM93079.1 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa) |
| | ychF | GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (364 aa) |
| | rpmF | 50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. (59 aa) |
| | ALM93103.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa) |
| | ALM93116.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (197 aa) |
| | rplS | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (116 aa) |
| | ALM93182.1 | Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa) |
| | ALM93201.1 | DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (686 aa) |
| | ALM93223.1 | Replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa) |
| | raiA | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (181 aa) |
| | cutC | Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family. (202 aa) |
| | ALM93251.1 | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL31 family. (81 aa) |
| | ALM93287.1 | Exonuclease SbcD; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa) |
| | ALM93306.1 | Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa) |
| | RO02_01365 | tRNA threonylcarbamoyl adenosine modification protein TsaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa) |
| | ALM93323.1 | N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa) |
| | recQ | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa) |
| | ALM93345.1 | N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa) |
| | ALM93382.1 | 4-hydroxybutyrate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa) |
| | ALM93390.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa) |
| | hemA | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (343 aa) |
| | ALM93415.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa) |
| | ALM93421.1 | FMN-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa) |
| | ALM93422.1 | FMN-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa) |
| | hutG | Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. (318 aa) |
| | ALM93451.1 | Redox-active disulfide protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa) |
| | ALM93465.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa) |
| | ALM93486.1 | Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (138 aa) |
| | ALM93501.1 | Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa) |
| | ribF | Bifunctional riboflavin kinase/FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family. (319 aa) |
| | ALM93545.1 | Formimidoyltetrahydrofolate cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa) |
| | ftcD | Glutamate formiminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa) |
| | ALM93550.1 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (820 aa) |
| | ybeY | rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (162 aa) |
| | ALM93587.1 | acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa) |
| | ALM93589.1 | Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa) |
| | ALM93606.1 | Cytochrome C biogenesis protein CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa) |
| | ALM93618.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. (91 aa) |
| | ALM93619.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (665 aa) |
| | ALM93646.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (605 aa) |
| | ALM93660.1 | Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (832 aa) |
| | ALM93690.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa) |
| | ALM93692.1 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa) |
| | ALM93704.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family. (232 aa) |
| | ALM93740.1 | Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (372 aa) |
| | purD | Phosphoribosylamine--glycine ligase; Catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family. (426 aa) |
| | purF | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (448 aa) |
| | ALM93786.1 | Ribonuclease HI; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa) |
| | bioB | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (360 aa) |
| | ALM93813.1 | Adhesin; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa) |
| | ALM93823.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. (102 aa) |
| | ALM93853.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa) |
| | ALM93865.1 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa) |
| | ALM93881.1 | N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa) |
| | ALM93885.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (756 aa) |
| | yqeH | Ribosome biogenesis GTPase YqeH; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa) |
| | ALM93909.1 | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa) |
| | RO02_04570 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa) |
| | ALM93919.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (55 aa) |
| | kptA | RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (179 aa) |
| | rplU | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (104 aa) |
| | ALM93940.1 | Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (824 aa) |
| | nadD | Nicotinate-nicotinamide nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (194 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (766 aa) |
| | ALM93977.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa) |
| | ALM95373.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa) |
| | ALM93983.1 | MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa) |
| | cobB | NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. (257 aa) |
| | ALM94012.1 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M20A family. (392 aa) |
| | rbgA | Ribosome biogenesis GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (289 aa) |
| | ALM94056.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (487 aa) |
| | ALM94060.1 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa) |
| | ALM94065.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa) |
| | ALM94067.1 | Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa) |
| | ALM94091.1 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (116 aa) |
| | ALM94100.1 | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (705 aa) |
| | rplQ | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (195 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa) |
| | rpmJ | 50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology. (37 aa) |
| | ALM94116.1 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (208 aa) |
| | ALM95381.1 | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (603 aa) |
| | ALM94141.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa) |
| | ALM94142.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa) |
| | ALM94241.1 | DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (713 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (151 aa) |
| | rpsI | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. (133 aa) |
| | rplM | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (144 aa) |
| | rpmI | 50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. (68 aa) |
| | rplT | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (116 aa) |
| | ALM94299.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa) |
| | ALM94301.1 | DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. (804 aa) |
| | ALM94330.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa) |
| | ALM94360.1 | Recombinase RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa) |
| | RO02_06920 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa) |
| | ALM95389.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa) |
| | recN | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (553 aa) |
| | ALM94408.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa) |
| | ALM94413.1 | O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa) |
| | ALM94432.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa) |
| | ALM94433.1 | Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa) |
| | ALM94466.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa) |
| | RO02_07580 | Trifunctional thioredoxin/methionine sulfoxide reductase A/B protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa) |
| | ALM94494.1 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa) |
| | ALM94503.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa) |
| | ALM94509.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (446 aa) |
| | ALM94566.1 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa) |
| | pduC | Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa) |
| | pduD | Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa) |
| | pduE | Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa) |
| | ALM95393.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa) |
| | ALM94571.1 | Ethanolamine utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa) |
| | ALM94572.1 | Ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa) |
| | ALM94573.1 | Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (206 aa) |
| | ALM94575.1 | Ethanolamine utilization protein EutN; Derived by automated computational analysis using gene prediction method: Protein Homology. (89 aa) |
| | ALM94583.1 | 9-O-acetyl-N-acetylneuraminate esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa) |
| | ALM94610.1 | 3-aminobutyryl-CoA ammonia lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa) |
| | rpsT | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (90 aa) |
| | ALM94635.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa) |
| | ALM94637.1 | Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa) |
| | rpsB | 30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. (247 aa) |
| | rplO | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (159 aa) |
| | rpmD | 50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology. (61 aa) |
| | rpsE | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (163 aa) |
| | rplR | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (122 aa) |
| | rplF | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rpsH | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rpsN | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (95 aa) |
| | rplE | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (183 aa) |
| | rplX | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (113 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (83 aa) |
| | rpmC | 50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. (60 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (142 aa) |
| | rpsC | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (219 aa) |
| | rplV | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (111 aa) |
| | rpsS | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (276 aa) |
| | rplW | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (95 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (209 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (211 aa) |
| | rpsJ | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rpsR | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (72 aa) |
| | rpsF | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (94 aa) |
| | ALM94733.1 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (760 aa) |
| | ALM95400.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (495 aa) |
| | atpB-2 | ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (458 aa) |
| | atpF-2 | ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane. (102 aa) |
| | ALM94765.1 | ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa) |
| | ALM94768.1 | ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family. (638 aa) |
| | ALM94780.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa) |
| | ispH | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (827 aa) |
| | ALM94800.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa) |
| | ALM94832.1 | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa) |
| | ALM94836.1 | Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (170 aa) |
| | rplL | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (121 aa) |
| | rplJ | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (170 aa) |
| | rplA | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (235 aa) |
| | rplK | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa) |
| | rpmG | 50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. (50 aa) |
| | ALM94888.1 | dGTP triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa) |
| | RO02_09875 | Amino acid carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa) |
| | ALM94896.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa) |
| | fhs | Formate--tetrahydrofolate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the formate--tetrahydrofolate ligase family. (544 aa) |
| | ALM94903.1 | 9-O-acetyl-N-acetylneuraminate esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa) |
| | ALM95406.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa) |
| | recF | Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (369 aa) |
| | rpmH | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | ALM94951.1 | DNA topology modulation protein FlaR; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa) |
| | ispE | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (294 aa) |
| | leuA | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (502 aa) |
| | rnmV | DNA primase; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. (183 aa) |
| | ALM95009.1 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (216 aa) |
| | nifS | Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (398 aa) |
| | ALM95019.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa) |
| | ALM95035.1 | DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa) |
| | ALM95041.1 | Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa) |
| | eutP | Ethanolamine utilization protein EutP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutP/PduV family. (145 aa) |
| | ALM95045.1 | Ethanolamine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa) |
| | eutC | Ethanolamine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutC family. (295 aa) |
| | ALM95048.1 | Microcompartment protein EutL; Carboxysome structural protein involved in ethanolamine utilization; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa) |
| | ALM95049.1 | Ethanolamine utilization protein EutM; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa) |
| | ALM95050.1 | Ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa) |
| | ALM95052.1 | Ethanolamine utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa) |
| | ALM95054.1 | Ethanolamine utilization protein EutN; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa) |
| | ALM95057.1 | Ethanolamine utilization protein EutQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa) |
| | rpsO | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (85 aa) |
| | ALM95106.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa) |
| | ALM95119.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa) |
| | ALM95416.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa) |
| | ALM95120.1 | GlcNAc transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (800 aa) |
| | ALM95417.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa) |
| | truA | Pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (247 aa) |
| | RO02_11635 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa) |
| | ALM95202.1 | Mini-ribonuclease 3-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa) |
| | rpsL | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (122 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | ALM95220.1 | PTS glucose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa) |
| | ALM95223.1 | acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa) |
| | ALM95225.1 | Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa) |
| | ALM95233.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa) |
| | ribD | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (369 aa) |
| | ALM95255.1 | 9-O-acetyl-N-acetylneuraminate esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa) |
| | ALM95256.1 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (233 aa) |
| | ALM95268.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa) |
| | mgtE | Magnesium transporter; Acts as a magnesium transporter. (443 aa) |
| | ALM95288.1 | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa) |
| | ALM95289.1 | Pyridoxal biosynthesis lyase PdxS; With PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa) |
| | ALM95305.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1718 aa) |
| | rpmB | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. (85 aa) |
| | ALM95315.1 | GlcNAc transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (813 aa) |
| | ALM95420.1 | GlcNAc transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa) |
| | ALM95330.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa) |
| | ALM95333.1 | Glutamate formiminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa) |
| | ALM95335.1 | Formimidoyltetrahydrofolate cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa) |
| | rpsP | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. (87 aa) |
| | ALM95349.1 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa) |
