STRINGSTRING
EGV19874.1 EGV19874.1 EGV20121.1 EGV20121.1 EGV19793.1 EGV19793.1 ackA ackA EGV19225.1 EGV19225.1 EGV18870.1 EGV18870.1 EGV18433.1 EGV18433.1 EGV18007.1 EGV18007.1 glcB glcB EGV17848.1 EGV17848.1 EGV17882.1 EGV17882.1 EGV17883.1 EGV17883.1 EGV16999.1 EGV16999.1 EGV17016.1 EGV17016.1 EGV16832.1 EGV16832.1 acsA acsA EGV16110.1 EGV16110.1 EGV16115.1 EGV16115.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGV19874.1Acetate--CoA ligase; KEGG: tgr:Tgr7_1511 propionate--CoA ligase; PFAM: AMP-dependent synthetase/ligase. (631 aa)
EGV20121.1PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; KEGG: rce:RC1_0405 malic enzyme. (753 aa)
EGV19793.1TIGRFAM: Isocitrate lyase; KEGG: alv:Alvin_1848 isocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase. (434 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (415 aa)
EGV19225.1Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (712 aa)
EGV18870.1Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); KEGG: vei:Veis_0807 malic enzyme; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase. (795 aa)
EGV18433.1KEGG: alv:Alvin_2161 citrate synthase I; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like; Belongs to the citrate synthase family. (429 aa)
EGV18007.1KEGG: alv:Alvin_0033 glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal. (1551 aa)
glcBMalate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (727 aa)
EGV17848.1Glutamate synthase (NADPH); KEGG: alv:Alvin_1259 DsrL protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup. (654 aa)
EGV17882.1TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate; KEGG: tmz:Tmz1t_2956 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding. (278 aa)
EGV17883.1TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: aeh:Mlg_0697 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Transketolase, C-terminal. (586 aa)
EGV16999.1PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; KEGG: alv:Alvin_1172 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. (1645 aa)
EGV17016.1TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: alv:Alvin_0264 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding. (1202 aa)
EGV16832.1CoA-binding domain protein; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; GCN5-related N-acetyltransferase; KEGG: alv:Alvin_1728 CoA-binding domain-containing protein. (892 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (648 aa)
EGV16110.1PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: alv:Alvin_1073 FAD linked oxidase domain-containing protein. (1289 aa)
EGV16115.1KEGG: alv:Alvin_0423 hypothetical protein. (604 aa)
Your Current Organism:
Thiocapsa marina
NCBI taxonomy Id: 768671
Other names: T. marina 5811, Thiocapsa marina 5811, Thiocapsa marina str. 5811, Thiocapsa marina strain 5811
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