STRINGSTRING
AFQ46020.1 AFQ46020.1 AFQ46078.1 AFQ46078.1 AFQ46083.1 AFQ46083.1 AFQ46196.1 AFQ46196.1 AFQ45781.1 AFQ45781.1 AFQ46223.1 AFQ46223.1 glpK glpK AFQ46353.1 AFQ46353.1 AFQ43028.1 AFQ43028.1 AFQ43087.1 AFQ43087.1 AFQ43437.1 AFQ43437.1 AFQ43005.1 AFQ43005.1 buk buk AFQ43591.1 AFQ43591.1 AFQ43650.1 AFQ43650.1 AFQ43715.1 AFQ43715.1 AFQ43766.1 AFQ43766.1 AFQ44187.1 AFQ44187.1 xylB xylB AFQ44312.1 AFQ44312.1 AFQ44390.1 AFQ44390.1 AFQ44533.1 AFQ44533.1 AFQ44508.1 AFQ44508.1 coaX coaX AFQ42739.1 AFQ42739.1 tsaD tsaD ackA ackA AFQ45171.1 AFQ45171.1 dnaK dnaK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFQ46020.1PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family. (339 aa)
AFQ46078.1PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative. (262 aa)
AFQ46083.1TIGRFAM: conserved hypothetical protein. (459 aa)
AFQ46196.1PFAM: Competence protein A; TIGRFAM: ethanolamine utilization protein EutJ family protein. (280 aa)
AFQ45781.1PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative. (246 aa)
AFQ46223.1PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative. (321 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. (498 aa)
AFQ46353.1PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family. (331 aa)
AFQ43028.1PFAM: Competence protein A. (484 aa)
AFQ43087.1PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative. (342 aa)
AFQ43437.1Hypothetical protein. (369 aa)
AFQ43005.1PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM. (336 aa)
bukPFAM: Acetokinase family; TIGRFAM: butyrate kinase; Belongs to the acetokinase family. (354 aa)
AFQ43591.1Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition; PFAM: Ethanolamine utilisation protein EutA. (485 aa)
AFQ43650.1PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative. (259 aa)
AFQ43715.1Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition; PFAM: Ethanolamine utilisation protein EutA. (475 aa)
AFQ43766.1PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative. (261 aa)
AFQ44187.1Transcriptional regulator/sugar kinase; PFAM: HTH domain; ROK family. (379 aa)
xylBD-xylulose kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase. (509 aa)
AFQ44312.1PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative. (322 aa)
AFQ44390.1N-methylhydantoinase A/acetone carboxylase, beta subunit; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region. (555 aa)
AFQ44533.1PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: cell division protein FtsA. (705 aa)
AFQ44508.1Hypothetical protein; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative. (1448 aa)
coaXPantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. (255 aa)
AFQ42739.1PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. (241 aa)
tsaDO-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (346 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (397 aa)
AFQ45171.1Putative metal-binding protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain. (601 aa)
dnaKChaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (615 aa)
Your Current Organism:
Desulfosporosinus meridiei
NCBI taxonomy Id: 768704
Other names: D. meridiei DSM 13257, Desulfosporosinus meridiei DSM 13257, Desulfosporosinus meridiei str. DSM 13257, Desulfosporosinus meridiei strain DSM 13257, Desulfosporosinus sp. S10
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