Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM3 | LSM4 | A0A0M8MV83 | A0A0M8MK24 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM3 | LSM5 | A0A0M8MV83 | A0A0M8MTP2 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
| LSM3 | LSM8 | A0A0M8MV83 | A0A0M9VPK5 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.998 |
| LSM3 | Malapachy_0053 | A0A0M8MV83 | A0A0M8MSN8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Sec63-domain-containing protein. | 0.992 |
| LSM3 | Malapachy_0101 | A0A0M8MV83 | A0A0M8MTW5 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Phf5-like protein. | 0.927 |
| LSM3 | Malapachy_0107 | A0A0M8MV83 | A0A0M9VNM6 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mrna-splicing factor 38a. | 0.790 |
| LSM3 | Malapachy_0192 | A0A0M8MV83 | A0A0M8MJ02 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mrna-splicing factor prp46. | 0.491 |
| LSM3 | Malapachy_0264 | A0A0M8MV83 | A0A0M8MT84 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.993 |
| LSM3 | Malapachy_0331 | A0A0M8MV83 | A0A0M9VMU8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Sm domain-containing protein. | 0.979 |
| LSM3 | Malapachy_0377 | A0A0M8MV83 | A0A0M8MSB7 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Peptide-binding protein. | 0.470 |
| LSM3 | Malapachy_0427 | A0A0M8MV83 | A0A0M8MSG8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Mads-box transcription factor-like protein. | 0.678 |
| LSM3 | Malapachy_0468 | A0A0M8MV83 | A0A0M8MI39 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Smad fha domain-containing protein. | 0.922 |
| LSM3 | Malapachy_0480 | A0A0M8MV83 | A0A0M8MSK8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Ubiquitin-like protein. | 0.715 |
| LSM3 | Malapachy_0545 | A0A0M8MV83 | A0A0M9VN29 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Atp-dependent rna helicase sub2. | 0.730 |
| LSM3 | Malapachy_0622 | A0A0M8MV83 | A0A0M9VPS6 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.993 |
| LSM3 | Malapachy_0717 | A0A0M8MV83 | A0A0M8MV37 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Nuclear cap-binding protein subunit 2. | 0.635 |
| LSM3 | Malapachy_0803 | A0A0M8MV83 | A0A0M8MV07 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Maternal g10 transcript. | 0.573 |
| LSM3 | Malapachy_1068 | A0A0M8MV83 | A0A0M8MV99 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.981 |
| LSM3 | Malapachy_1073 | A0A0M8MV83 | A0A0M9VQ01 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleo protein. | 0.979 |
| LSM3 | Malapachy_1172 | A0A0M8MV83 | A0A0M8MVL4 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Rna-binding protein with serine-rich domain 1-like protein. | 0.435 |
page 1 of 388