14 items (Malassezia pachydermatis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Malapachy_1094	Rna-binding protein nhp2. (201 aa)
	Malapachy_2551	Trna pseudouridine synthase d. (681 aa)
	Malapachy_1806	Uncharacterized protein. (349 aa)
	Malapachy_3658	Pseudouridine synthase. (1102 aa)
	Malapachy_1123	H aca ribonucleoprotein complex subunit 3. (62 aa)
	Malapachy_3450	Pseudouridine synthase. (501 aa)
	Malapachy_2719	Snornp assembly factor. (470 aa)
	Malapachy_4016	Dolichyl pyrophosphate (Dol-P-P) phosphatase. (452 aa)
	Malapachy_3015	Indigoidine synthase a-like protein. (694 aa)
	Malapachy_4151	Pseudouridine synthase. (895 aa)
	TSR3	Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (315 aa)
	Malapachy_1829	Rrna pseudouridine synthase. (489 aa)
	Malapachy_1828	Pseudouridine synthase. (367 aa)
	Malapachy_0459	Uncharacterized protein. (417 aa)

Your Current Organism:

Malassezia pachydermatis

NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Malapachy_0459	Malapachy_1094	A0A0M8MJL6	A0A0M9VQ31	Uncharacterized protein.	Rna-binding protein nhp2.	0.754
Malapachy_0459	Malapachy_1123	A0A0M8MJL6	A0A0M9VPM4	Uncharacterized protein.	H aca ribonucleoprotein complex subunit 3.	0.749
Malapachy_0459	Malapachy_1828	A0A0M8MJL6	A0A0M8MJQ9	Uncharacterized protein.	Pseudouridine synthase.	0.682
Malapachy_0459	Malapachy_1829	A0A0M8MJL6	A0A0M8MNV3	Uncharacterized protein.	Rrna pseudouridine synthase.	0.793
Malapachy_1094	Malapachy_0459	A0A0M9VQ31	A0A0M8MJL6	Rna-binding protein nhp2.	Uncharacterized protein.	0.754
Malapachy_1094	Malapachy_1123	A0A0M9VQ31	A0A0M9VPM4	Rna-binding protein nhp2.	H aca ribonucleoprotein complex subunit 3.	0.999
Malapachy_1094	Malapachy_1806	A0A0M9VQ31	A0A0N0RS43	Rna-binding protein nhp2.	Uncharacterized protein.	0.771
Malapachy_1094	Malapachy_1828	A0A0M9VQ31	A0A0M8MJQ9	Rna-binding protein nhp2.	Pseudouridine synthase.	0.979
Malapachy_1094	Malapachy_1829	A0A0M9VQ31	A0A0M8MNV3	Rna-binding protein nhp2.	Rrna pseudouridine synthase.	0.999
Malapachy_1094	Malapachy_2551	A0A0M9VQ31	A0A0N0RSI7	Rna-binding protein nhp2.	Trna pseudouridine synthase d.	0.608
Malapachy_1094	Malapachy_2719	A0A0M9VQ31	A0A0M8MX73	Rna-binding protein nhp2.	Snornp assembly factor.	0.771
Malapachy_1094	Malapachy_3450	A0A0M9VQ31	A0A0M8MYC9	Rna-binding protein nhp2.	Pseudouridine synthase.	0.533
Malapachy_1123	Malapachy_0459	A0A0M9VPM4	A0A0M8MJL6	H aca ribonucleoprotein complex subunit 3.	Uncharacterized protein.	0.749
Malapachy_1123	Malapachy_1094	A0A0M9VPM4	A0A0M9VQ31	H aca ribonucleoprotein complex subunit 3.	Rna-binding protein nhp2.	0.999
Malapachy_1123	Malapachy_1806	A0A0M9VPM4	A0A0N0RS43	H aca ribonucleoprotein complex subunit 3.	Uncharacterized protein.	0.756
Malapachy_1123	Malapachy_1828	A0A0M9VPM4	A0A0M8MJQ9	H aca ribonucleoprotein complex subunit 3.	Pseudouridine synthase.	0.965
Malapachy_1123	Malapachy_1829	A0A0M9VPM4	A0A0M8MNV3	H aca ribonucleoprotein complex subunit 3.	Rrna pseudouridine synthase.	0.997
Malapachy_1123	Malapachy_2551	A0A0M9VPM4	A0A0N0RSI7	H aca ribonucleoprotein complex subunit 3.	Trna pseudouridine synthase d.	0.565
Malapachy_1123	Malapachy_2719	A0A0M9VPM4	A0A0M8MX73	H aca ribonucleoprotein complex subunit 3.	Snornp assembly factor.	0.756
Malapachy_1806	Malapachy_1094	A0A0N0RS43	A0A0M9VQ31	Uncharacterized protein.	Rna-binding protein nhp2.	0.771