STRINGSTRING
Malapachy_2779 Malapachy_2779 Malapachy_1518 Malapachy_1518 Malapachy_1418 Malapachy_1418 Malapachy_1494 Malapachy_1494 Malapachy_1895 Malapachy_1895 Malapachy_1708 Malapachy_1708 Malapachy_1997 Malapachy_1997 Malapachy_3704 Malapachy_3704 Malapachy_2264 Malapachy_2264 Malapachy_3966 Malapachy_3966 Malapachy_2366 Malapachy_2366 Malapachy_1750 Malapachy_1750 Malapachy_2536 Malapachy_2536 Malapachy_3302 Malapachy_3302 Malapachy_3645 Malapachy_3645 Malapachy_3559 Malapachy_3559 Malapachy_3227 Malapachy_3227 Malapachy_2736 Malapachy_2736 Malapachy_1186 Malapachy_1186 Malapachy_0622 Malapachy_0622 Malapachy_1212 Malapachy_1212 Malapachy_0331 Malapachy_0331 Malapachy_2202 Malapachy_2202 Malapachy_3251 Malapachy_3251 Malapachy_2278 Malapachy_2278 Malapachy_1219 Malapachy_1219 Malapachy_1068 Malapachy_1068 Malapachy_0717 Malapachy_0717 Malapachy_3854 Malapachy_3854 Malapachy_3930 Malapachy_3930 Malapachy_1936 Malapachy_1936 Malapachy_1991 Malapachy_1991 Malapachy_0427 Malapachy_0427 Malapachy_0377 Malapachy_0377 Malapachy_2514 Malapachy_2514 Malapachy_1463 Malapachy_1463 Malapachy_2829 Malapachy_2829 Malapachy_3184 Malapachy_3184 Malapachy_1715 Malapachy_1715 Malapachy_2739 Malapachy_2739 Malapachy_4197 Malapachy_4197 Malapachy_3651 Malapachy_3651 Malapachy_3492 Malapachy_3492 Malapachy_2927 Malapachy_2927
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Malapachy_2779Pre-mrna-splicing factor slt11. (307 aa)
Malapachy_1518Pre-mrna splicing factor. (774 aa)
Malapachy_1418Pre-mrna-splicing factor clf1. (721 aa)
Malapachy_1494Nuclear mrna splicing factor-associated. (378 aa)
Malapachy_1895Uncharacterized protein. (336 aa)
Malapachy_1708Pre-mrna splicing factor. (235 aa)
Malapachy_1997Pre-mrna splicing factor cwc2. (393 aa)
Malapachy_3704Rna-binding domain-containing protein. (327 aa)
Malapachy_2264P-loop containing nucleoside triphosphate hydrolase protein. (950 aa)
Malapachy_3966U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (148 aa)
Malapachy_2366Spliceosomal zinc finger-containing protein. (314 aa)
Malapachy_1750P-loop containing nucleoside triphosphate hydrolase protein. (990 aa)
Malapachy_2536Splicing factor 3a subunit 2. (257 aa)
Malapachy_3302Uncharacterized protein. (133 aa)
Malapachy_3645Microfibrillar-associated protein 1. (359 aa)
Malapachy_3559Spliceosome-associated protein sap-49. (215 aa)
Malapachy_3227Uncharacterized protein. (597 aa)
Malapachy_2736Tfp11-domain-containing protein. (794 aa)
Malapachy_1186Spliceosome complex protein. (1002 aa)
Malapachy_0622Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
Malapachy_1212Pre-mrna splicing factor u2af large chain. (466 aa)
Malapachy_0331Sm domain-containing protein. (187 aa)
Malapachy_2202Rna-binding domain-containing protein. (196 aa)
Malapachy_3251Rna-binding domain-containing protein. (113 aa)
Malapachy_2278PSP domain-containing protein. (525 aa)
Malapachy_1219Formin binding protein 3. (643 aa)
Malapachy_1068Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
Malapachy_0717Nuclear cap-binding protein subunit 2. (244 aa)
Malapachy_3854Uncharacterized protein. (678 aa)
Malapachy_3930Cir_N domain-containing protein. (394 aa)
Malapachy_1936Complexed with cdc5 protein cwf19. (717 aa)
Malapachy_1991Pre-mrna splicing factor. (956 aa)
Malapachy_0427Mads-box transcription factor-like protein. (257 aa)
Malapachy_0377Peptide-binding protein. (666 aa)
Malapachy_2514Splicing factor 3b subunit 1. (1184 aa)
Malapachy_1463Uncharacterized protein. (287 aa)
Malapachy_2829Pre-mrna splicing factor. (667 aa)
Malapachy_3184Small nuclear ribonucleoprotein. (265 aa)
Malapachy_1715Rna splicing factor prp9. (521 aa)
Malapachy_2739Rna recognition motif containing protein. (475 aa)
Malapachy_4197Small nuclear ribonucleoprotein Sm D2. (111 aa)
Malapachy_3651Nuclear matrix protein. (536 aa)
Malapachy_3492Small nuclear ribonucleoprotein. (124 aa)
Malapachy_2927Small nuclear ribonucleoprotein G. (86 aa)
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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