(27 nodes) HAD superfamily network (Malassezia pachydermatis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Malapachy_0863	Magnesium-dependent phosphatase-1. (190 aa)
	Malapachy_4000	Copper P-type atpase. (915 aa)
	Malapachy_3180	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (989 aa)
	Malapachy_3335	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1115 aa)
	Malapachy_2485	Uncharacterized protein. (270 aa)
	Malapachy_4190	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1279 aa)
	Malapachy_1356	LNS2 domain-containing protein. (975 aa)
	Malapachy_3512	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (488 aa)
	Malapachy_2643	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1507 aa)
	Malapachy_2212	Uncharacterized protein. (375 aa)
	Malapachy_2261	Ena2-plasma membrane P-type atpase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1087 aa)
	Malapachy_2238	Protein phosphatase. (531 aa)
	Malapachy_1195	Uncharacterized protein. (280 aa)
	Malapachy_2707	Trehalose 6-phosphate phosphatase. (1015 aa)
	Malapachy_0146	Uncharacterized protein. (251 aa)
	Malapachy_0605	Hor2-dl-glycerol phosphatase. (257 aa)
	Malapachy_0607	Hor2-dl-glycerol phosphatase. (251 aa)
	Malapachy_2885	Nif-domain-containing protein. (280 aa)
	Malapachy_0531	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1189 aa)
	Malapachy_3237	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (1064 aa)
	Malapachy_3718	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (449 aa)
	Malapachy_3147	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (661 aa)
	Malapachy_2310	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1558 aa)
	Malapachy_1520	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1253 aa)
	Malapachy_1301	Pyrimidine 5-nucleotidase. (260 aa)
	Malapachy_0147	4-nitrophenylphosphatase. (323 aa)
	Malapachy_0461	Translation initiation factor eif3a. (254 aa)

Your Current Organism:

Malassezia pachydermatis

NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Malapachy_0147	Malapachy_2212	A0A0M8MKI7	A0A0M8MXG7	4-nitrophenylphosphatase.	Uncharacterized protein.	0.450
Malapachy_0461	Malapachy_1356	A0A0M8MJJ4	A0A0M9VMX5	Translation initiation factor eif3a.	LNS2 domain-containing protein.	0.805
Malapachy_0531	Malapachy_2261	A0A0M8MRH6	A0A0M8MX47	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.	Ena2-plasma membrane P-type atpase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	0.457
Malapachy_0531	Malapachy_3180	A0A0M8MRH6	A0A0M9VR58	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.602
Malapachy_0531	Malapachy_3335	A0A0M8MRH6	A0A0M9VQW5	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.691
Malapachy_0531	Malapachy_4000	A0A0M8MRH6	A0A0N0RS97	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.	Copper P-type atpase.	0.541
Malapachy_0605	Malapachy_2707	A0A0M8MSV0	A0A0M8MW53	Hor2-dl-glycerol phosphatase.	Trehalose 6-phosphate phosphatase.	0.457
Malapachy_0605	Malapachy_3718	A0A0M8MSV0	A0A0M8MPB6	Hor2-dl-glycerol phosphatase.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.496
Malapachy_0607	Malapachy_2707	A0A0M8MSJ5	A0A0M8MW53	Hor2-dl-glycerol phosphatase.	Trehalose 6-phosphate phosphatase.	0.457
Malapachy_0607	Malapachy_3718	A0A0M8MSJ5	A0A0M8MPB6	Hor2-dl-glycerol phosphatase.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.496
Malapachy_1195	Malapachy_1301	A0A0M8MWG2	A0A0M8MLY5	Uncharacterized protein.	Pyrimidine 5-nucleotidase.	0.408
Malapachy_1195	Malapachy_2707	A0A0M8MWG2	A0A0M8MW53	Uncharacterized protein.	Trehalose 6-phosphate phosphatase.	0.457
Malapachy_1195	Malapachy_3718	A0A0M8MWG2	A0A0M8MPB6	Uncharacterized protein.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.496
Malapachy_1301	Malapachy_1195	A0A0M8MLY5	A0A0M8MWG2	Pyrimidine 5-nucleotidase.	Uncharacterized protein.	0.408
Malapachy_1301	Malapachy_2212	A0A0M8MLY5	A0A0M8MXG7	Pyrimidine 5-nucleotidase.	Uncharacterized protein.	0.879
Malapachy_1301	Malapachy_3718	A0A0M8MLY5	A0A0M8MPB6	Pyrimidine 5-nucleotidase.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.631
Malapachy_1356	Malapachy_0461	A0A0M9VMX5	A0A0M8MJJ4	LNS2 domain-containing protein.	Translation initiation factor eif3a.	0.805
Malapachy_1356	Malapachy_2238	A0A0M9VMX5	A0A0M8MWN0	LNS2 domain-containing protein.	Protein phosphatase.	0.805
Malapachy_1356	Malapachy_2885	A0A0M9VMX5	A0A0M8MS11	LNS2 domain-containing protein.	Nif-domain-containing protein.	0.935
Malapachy_1356	Malapachy_3147	A0A0M9VMX5	A0A0M8MNU8	LNS2 domain-containing protein.	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	0.753