STRINGSTRING
Malapachy_2007 Malapachy_2007 Malapachy_2708 Malapachy_2708 Malapachy_2190 Malapachy_2190 Malapachy_2918 Malapachy_2918 Malapachy_0986 Malapachy_0986 Malapachy_1066 Malapachy_1066 Malapachy_0179 Malapachy_0179
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Malapachy_2007Ubiquitin domain containing protein. (144 aa)
Malapachy_2708Dna repair protein. (826 aa)
Malapachy_2190Uv-damaged dna-binding protein. (1159 aa)
Malapachy_2918E3 ubiquitin-protein ligase rbx1. (103 aa)
Malapachy_0986Cdc31-spindle pole body centrin. (183 aa)
Malapachy_1066Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (617 aa)
Malapachy_0179Cullin 4a; Belongs to the cullin family. (608 aa)
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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