48 items (Malassezia pachydermatis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Malapachy_1478	Transcription elongation factor. (299 aa)
	Malapachy_1287	Dna repair helicase rad25. (748 aa)
	Malapachy_1320	Ubiquitin carboxy terminal hydrolase ubp2; Belongs to the peptidase C19 family. (1023 aa)
	Malapachy_3654	Peptidyl-prolyl cis-trans isomerase e. (120 aa)
	Malapachy_2621	Dna polymerase delta subunit 4. (170 aa)
	Malapachy_0804	Transcription factor tfb4. (353 aa)
	Malapachy_0739	Dna repair helicase. (836 aa)
	Malapachy_2918	E3 ubiquitin-protein ligase rbx1. (103 aa)
	Malapachy_3240	Rfa2-dna replication factor 36 kDa subunit. (246 aa)
	Malapachy_1852	Uncharacterized protein. (235 aa)
	Malapachy_0179	Cullin 4a; Belongs to the cullin family. (608 aa)
	Malapachy_3385	Dna-directed rna polymerase ii. (163 aa)
	Malapachy_1430	Udp-galactopyranose mutase. (503 aa)
	Malapachy_1396	Synaptic vesicle transporter. (844 aa)
	Malapachy_0359	Dna replication factor c large subunit. (743 aa)
	Malapachy_1182	Cmgc cdk cdk7 protein kinase; Belongs to the protein kinase superfamily. (370 aa)
	Malapachy_3695	Rpb4-16 kd subunit of dna-directed rna polymerase ii. (162 aa)
	Malapachy_2924	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (513 aa)
	Malapachy_3622	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (124 aa)
	Malapachy_3092	Insert subdomain of rna polymerase alpha subunit. (331 aa)
	Malapachy_3144	P-loop containing nucleoside triphosphate hydrolase protein. (482 aa)
	Malapachy_3111	P-loop containing nucleoside triphosphate hydrolase protein. (784 aa)
	Malapachy_2007	Ubiquitin domain containing protein. (144 aa)
	Malapachy_1256	Tfb1-subunit of rna polymerase ii transcription initiation factor tfiih. (580 aa)
	Malapachy_2190	Uv-damaged dna-binding protein. (1159 aa)
	Malapachy_0756	Single-stranded dna binding protein 12k chain. (111 aa)
	Malapachy_3651	Nuclear matrix protein. (536 aa)
	Malapachy_1066	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (617 aa)
	Malapachy_2371	Cyclin-like protein; Belongs to the cyclin family. (436 aa)
	Malapachy_2639	Uncharacterized protein. (294 aa)
	Malapachy_1201	Rna polymerase ii subunit. (155 aa)
	Malapachy_2432	Dna-directed rna polymerase subunit. (73 aa)
	Malapachy_3778	P-loop containing nucleoside triphosphate hydrolase protein. (333 aa)
	Malapachy_3895	Peptidyl-prolyl cis-trans isomerase. (525 aa)
	Malapachy_1226	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1770 aa)
	Malapachy_3887	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1197 aa)
	Malapachy_2000	P-loop containing nucleoside triphosphate hydrolase protein. (341 aa)
	Malapachy_0386	Dna polymerase subunit cdc27. (240 aa)
	Malapachy_0284	Cysteine proteinase; Belongs to the peptidase C19 family. (1120 aa)
	Malapachy_0234	Rpc10-dna-directed rna polymerases iii kd subunit. (64 aa)
	Malapachy_0051	P-loop containing nucleoside triphosphate hydrolase protein. (353 aa)
	Malapachy_1882	Rpo26-18kd subunit of dna-directed rna polymerases iii. (146 aa)
	Malapachy_4095	Cdk-activating kinase assembly factor. (350 aa)
	Malapachy_4214	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (149 aa)
	Malapachy_1044	Zds_C domain-containing protein. (773 aa)
	Malapachy_1186	Spliceosome complex protein. (1002 aa)
	Malapachy_2454	Dna polymerase epsilon p12 subunit (Dna polymerase epsilon subunit 4). (226 aa)
	Malapachy_2282	Rpb5 subunit of dna-directed rna polymerase. (207 aa)

Your Current Organism:

Malassezia pachydermatis

NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Malapachy_0051	Malapachy_0179	A0A0M9VNU9	A0A0M8MTF8	P-loop containing nucleoside triphosphate hydrolase protein.	Cullin 4a; Belongs to the cullin family.	0.614
Malapachy_0051	Malapachy_0359	A0A0M9VNU9	A0A0M8MR38	P-loop containing nucleoside triphosphate hydrolase protein.	Dna replication factor c large subunit.	0.999
Malapachy_0051	Malapachy_0386	A0A0M9VNU9	A0A0M8MHN2	P-loop containing nucleoside triphosphate hydrolase protein.	Dna polymerase subunit cdc27.	0.653
Malapachy_0051	Malapachy_0739	A0A0M9VNU9	A0A0M8MVA6	P-loop containing nucleoside triphosphate hydrolase protein.	Dna repair helicase.	0.641
Malapachy_0051	Malapachy_0756	A0A0M9VNU9	A0A0M8MQE6	P-loop containing nucleoside triphosphate hydrolase protein.	Single-stranded dna binding protein 12k chain.	0.450
Malapachy_0051	Malapachy_1044	A0A0M9VNU9	A0A0M9VPX5	P-loop containing nucleoside triphosphate hydrolase protein.	Zds_C domain-containing protein.	0.450
Malapachy_0051	Malapachy_1066	A0A0M9VNU9	A0A0M8MN58	P-loop containing nucleoside triphosphate hydrolase protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.828
Malapachy_0051	Malapachy_1256	A0A0M9VNU9	A0A0N0RSG1	P-loop containing nucleoside triphosphate hydrolase protein.	Tfb1-subunit of rna polymerase ii transcription initiation factor tfiih.	0.579
Malapachy_0051	Malapachy_1287	A0A0M9VNU9	A0A0M9VN01	P-loop containing nucleoside triphosphate hydrolase protein.	Dna repair helicase rad25.	0.625
Malapachy_0051	Malapachy_1430	A0A0M9VNU9	A0A0M8MT71	P-loop containing nucleoside triphosphate hydrolase protein.	Udp-galactopyranose mutase.	0.450
Malapachy_0051	Malapachy_2000	A0A0M9VNU9	A0A0M8MJF2	P-loop containing nucleoside triphosphate hydrolase protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.999
Malapachy_0051	Malapachy_2007	A0A0M9VNU9	A0A0N0RS39	P-loop containing nucleoside triphosphate hydrolase protein.	Ubiquitin domain containing protein.	0.643
Malapachy_0051	Malapachy_2190	A0A0M9VNU9	A0A0N0RSK7	P-loop containing nucleoside triphosphate hydrolase protein.	Uv-damaged dna-binding protein.	0.634
Malapachy_0051	Malapachy_2621	A0A0M9VNU9	A0A0M8MX56	P-loop containing nucleoside triphosphate hydrolase protein.	Dna polymerase delta subunit 4.	0.555
Malapachy_0051	Malapachy_2918	A0A0M9VNU9	A0A0N0RSQ1	P-loop containing nucleoside triphosphate hydrolase protein.	E3 ubiquitin-protein ligase rbx1.	0.638
Malapachy_0051	Malapachy_2924	A0A0M9VNU9	A0A0M9VR26	P-loop containing nucleoside triphosphate hydrolase protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.609
Malapachy_0051	Malapachy_3111	A0A0M9VNU9	A0A0M9VRA7	P-loop containing nucleoside triphosphate hydrolase protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.982
Malapachy_0051	Malapachy_3144	A0A0M9VNU9	A0A0M9VR99	P-loop containing nucleoside triphosphate hydrolase protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.999
Malapachy_0051	Malapachy_3240	A0A0M9VNU9	A0A0M9VQT5	P-loop containing nucleoside triphosphate hydrolase protein.	Rfa2-dna replication factor 36 kDa subunit.	0.862
Malapachy_0051	Malapachy_3778	A0A0M9VNU9	A0A0M8MLY6	P-loop containing nucleoside triphosphate hydrolase protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.999