122 items (Malassezia pachydermatis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Malapachy_1562	Rna-binding domain-containing protein. (885 aa)
	Malapachy_0555	Mrps8-mitochondrial ribosomal small subunit. (153 aa)
	Malapachy_1594	Ribosome biogenesis protein noc4. (671 aa)
	Malapachy_0237	Ribosomal protein s25. (284 aa)
	Malapachy_0220	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
	Malapachy_0006	40s ribosomal protein s14; Belongs to the universal ribosomal protein uS11 family. (148 aa)
	Malapachy_0320	40s ribosomal protein s3. (252 aa)
	Malapachy_0557	Brix-domain-containing protein. (295 aa)
	Malapachy_1644	Fcf1-domain-containing protein. (194 aa)
	Malapachy_3951	Csl4-exosome core component. (226 aa)
	Malapachy_0156	Casein kinase-1 hhp1; Belongs to the protein kinase superfamily. (397 aa)
	Malapachy_1847	Nuclear cut8 family protein. (392 aa)
	Malapachy_0471	Wd40 repeat-like protein. (588 aa)
	Malapachy_2476	P-loop containing nucleoside triphosphate hydrolase protein. (558 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (650 aa)
	Malapachy_1419	Atp-dependent rrna helicase rrp3; Belongs to the DEAD box helicase family. (475 aa)
	Malapachy_2068	Antiviral helicase. (1037 aa)
	Malapachy_1583	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (206 aa)
	Malapachy_0794	40s ribosomal protein s13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	Malapachy_1649	60s ribosomal protein l34-b. (113 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (837 aa)
	Malapachy_3665	Uncharacterized protein. (495 aa)
	Malapachy_0235	Alpha-l rna-binding motif-containing protein. (411 aa)
	Malapachy_0856	Nop domain-containing protein. (534 aa)
	Malapachy_1087	Wd40 repeat-like protein. (492 aa)
	Malapachy_2145	Sumo deconjugating cysteine peptidase ulp2. (676 aa)
	Malapachy_1766	40s ribosomal protein s22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (890 aa)
	Malapachy_3112	Uncharacterized protein. (695 aa)
	Malapachy_0882	RIX1 domain-containing protein. (800 aa)
	Malapachy_3154	Wd40 repeat-like protein. (820 aa)
	Malapachy_0635	U3 small nucleolar rna-associated protein 10. (2057 aa)
	Malapachy_3141	60s ribosomal protein l2. (254 aa)
	Malapachy_2689	Uncharacterized protein. (497 aa)
	Malapachy_2537	Utp13-u3 snornp protein. (921 aa)
	Malapachy_2497	Exosome complex exonuclease rrp40. (280 aa)
	Malapachy_0476	60s ribosomal protein l43. (92 aa)
	Malapachy_2785	40s ribosomal protein s10. (142 aa)
	Malapachy_2797	Exosome complex exonuclease rrp4. (348 aa)
	Malapachy_2196	Sas10 domain-containing protein. (653 aa)
	Malapachy_3474	Meiotically up-regulated protein. (520 aa)
	Malapachy_0436	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (122 aa)
	Malapachy_1842	Nuc189-domain-containing protein. (776 aa)
	Malapachy_3603	40s ribosomal protein s29-a. (56 aa)
	Malapachy_1612	Wd40 repeat-like protein. (557 aa)
	Malapachy_0178	Utp14-domain-containing protein. (831 aa)
	Malapachy_1790	Six-hairpin glycosidase. (348 aa)
	Malapachy_3816	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (654 aa)
	Malapachy_1736	Rrp6-exonuclease component of the nuclear exosome. (842 aa)
	Malapachy_1867	40s ribosomal protein s28. (72 aa)
	Malapachy_1814	40s ribosomal protein s5-1; Belongs to the universal ribosomal protein uS7 family. (206 aa)
	Malapachy_1177	40s ribosomal protein s9; Belongs to the universal ribosomal protein uS4 family. (202 aa)
	Malapachy_3989	Uncharacterized protein. (656 aa)
	Malapachy_4015	Nop52-domain-containing protein. (358 aa)
	Malapachy_3701	Atp-dependent rna helicase rok1; Belongs to the DEAD box helicase family. (543 aa)
	Malapachy_3919	Uncharacterized protein. (189 aa)
	Malapachy_2224	Ribosome biogenesis protein bms1. (1001 aa)
	Malapachy_2076	40s ribosomal protein s18; Belongs to the universal ribosomal protein uS13 family. (154 aa)
	Malapachy_0770	Utp21-domain-containing protein. (955 aa)
	Malapachy_2625	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (146 aa)
	Malapachy_2645	40s ribosomal protein s11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	Malapachy_2472	Mitochondrial ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family. (184 aa)
	Malapachy_2672	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (454 aa)
	Malapachy_2539	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family. (250 aa)
	Malapachy_2735	U3 small nucleolar RNA-associated protein 22. (1212 aa)
	Malapachy_2703	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (352 aa)
	Malapachy_2429	40s ribosomal protein s23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	Malapachy_2398	Uncharacterized protein. (328 aa)
	Malapachy_2213	P-loop containing nucleoside triphosphate hydrolase protein. (1336 aa)
	Malapachy_3077	Emg1-protein required for ribosome biogenesis. (385 aa)
	Malapachy_3531	Rrna processing protein rrp7. (355 aa)
	Malapachy_3620	18s rrna biogenesis protein. (368 aa)
	Malapachy_3090	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1096 aa)
	Malapachy_1331	Pre-rrna-processing protein pno1. (304 aa)
	Malapachy_2837	Wd40 repeat-like protein. (497 aa)
	Malapachy_0536	Uncharacterized protein. (479 aa)
	Malapachy_0591	Sentrin-specific protease 1. (630 aa)
	Malapachy_1347	Ribosome biogenesis protein tsr1. (880 aa)
	Malapachy_1603	Uncharacterized protein. (332 aa)
	Malapachy_1574	Wd-repeat-containing protein. (944 aa)
	Malapachy_0141	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	Malapachy_0182	Rrna processing protein. (386 aa)
	Malapachy_0007	Mpp10 protein. (789 aa)
	Malapachy_0112	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (278 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (262 aa)
	Malapachy_1937	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
	Malapachy_0109	Ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family. (147 aa)
	Malapachy_1756	40s ribosomal protein s17. (144 aa)
	Malapachy_4110	Uncharacterized protein. (279 aa)
	Malapachy_3940	Atp-dependent rna helicase; Belongs to the DEAD box helicase family. (481 aa)
	Malapachy_4184	Rna exonuclease 4. (321 aa)
	Malapachy_3703	Serine threonine-protein kinase rio2. (530 aa)
	Malapachy_4257	Drim (Down-regulated in metastasis)-like protein. (2652 aa)
	Malapachy_3755	Bing4ct-domain-containing protein. (608 aa)
	Malapachy_3909	Uncharacterized protein. (583 aa)
	Malapachy_3905	U3 snornp-associated protein rrp5. (1504 aa)
	Malapachy_1112	Nop14-like protein. (938 aa)
	Malapachy_1214	Uncharacterized protein. (396 aa)
	Malapachy_1005	U3 snornp protein. (1018 aa)
	Malapachy_1232	RNase_PH domain-containing protein. (311 aa)
	Malapachy_0771	Wd repeat. (868 aa)
	Malapachy_0820	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (230 aa)
	Malapachy_1077	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
	Malapachy_0859	Bud23-protein involved in bud-site selection. (292 aa)
	Malapachy_0841	Uncharacterized protein. (75 aa)
	Malapachy_2260	Nop1-fibrillarin. (315 aa)
	Malapachy_2650	RNase_PH domain-containing protein. (218 aa)
	Malapachy_2158	Rio1-domain-containing protein. (651 aa)
	Malapachy_2163	40s ribosomal protein s19. (159 aa)
	Malapachy_2508	GN3L_Grn1 domain-containing protein. (608 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (290 aa)
	Malapachy_3462	RNase_PH domain-containing protein. (266 aa)
	Malapachy_3070	Alpha-l rna-binding motif-containing protein. (182 aa)
	Malapachy_3437	60s ribosomal protein l28. (151 aa)
	Malapachy_2907	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	Malapachy_3232	Uncharacterized protein. (207 aa)
	Malapachy_3167	Wd40 repeat-like protein. (838 aa)
	Malapachy_3589	Nop-domain-containing protein. (518 aa)
	Malapachy_0563	40S ribosomal protein S27. (90 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (515 aa)
	Malapachy_0724	Wd40 repeat-like protein. (554 aa)
	Malapachy_1088	40s ribosomal protein s20. (121 aa)

Your Current Organism:

Malassezia pachydermatis

NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	Malapachy_0007	A0A0M8MN18	A0A0M9VNM0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Mpp10 protein.	0.747
ERB1	Malapachy_0109	A0A0M8MN18	A0A0M9VNT7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family.	0.728
ERB1	Malapachy_0141	A0A0M8MN18	A0A0M9VNI1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.970
ERB1	Malapachy_0178	A0A0M8MN18	A0A0M8MTR8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Utp14-domain-containing protein.	0.874
ERB1	Malapachy_0471	A0A0M8MN18	A0A0M8MM03	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Wd40 repeat-like protein.	0.772
ERB1	Malapachy_0476	A0A0M8MN18	A0A0M8MRE7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60s ribosomal protein l43.	0.749
ERB1	Malapachy_0536	A0A0M8MN18	A0A0M9VN16	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.993
ERB1	Malapachy_0557	A0A0M8MN18	A0A0M8MJR1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix-domain-containing protein.	0.838
ERB1	Malapachy_0591	A0A0M8MN18	A0A0M9VN56	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Sentrin-specific protease 1.	0.705
ERB1	Malapachy_0635	A0A0M8MN18	A0A0M8MQB8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 small nucleolar rna-associated protein 10.	0.933
ERB1	Malapachy_0724	A0A0M8MN18	A0A0N0RSE0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Wd40 repeat-like protein.	0.555
ERB1	Malapachy_0770	A0A0M8MN18	A0A0M8MVW3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Utp21-domain-containing protein.	0.908
ERB1	Malapachy_0771	A0A0M8MN18	A0A0M9VPV4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Wd repeat.	0.945
ERB1	Malapachy_0820	A0A0M8MN18	A0A0M9VPY5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.407
ERB1	Malapachy_0856	A0A0M8MN18	A0A0M8MNA9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nop domain-containing protein.	0.978
ERB1	Malapachy_0882	A0A0M8MN18	A0A0M8MQ78	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RIX1 domain-containing protein.	0.929
ERB1	Malapachy_1005	A0A0M8MN18	A0A0M9VPQ3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 snornp protein.	0.741
ERB1	Malapachy_1087	A0A0M8MN18	A0A0M8MNB8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Wd40 repeat-like protein.	0.555
ERB1	Malapachy_1112	A0A0M8MN18	A0A0M9VPM9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nop14-like protein.	0.835
ERB1	Malapachy_1214	A0A0M8MN18	A0A0M9VPP8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.518