20 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_09617	PX domain-containing protein. (485 aa)
	D910_10836	PX domain-containing protein. (280 aa)
	D910_03336	Uncharacterized protein. (403 aa)
	D910_07606	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (865 aa)
	D910_03488	Uncharacterized protein. (543 aa)
	D910_02994	Uncharacterized protein. (336 aa)
	D910_11537	PX domain-containing protein. (474 aa)
	D910_08991	PX domain-containing protein. (463 aa)
	D910_02377	AAA_5 domain-containing protein. (151 aa)
	D910_01195	Uncharacterized protein. (729 aa)
	D910_02872	PX domain-containing protein; Belongs to the tetraspanin (TM4SF) family. (682 aa)
	D910_05691	PX domain-containing protein. (558 aa)
	D910_02378	VWFA domain-containing protein. (1001 aa)
	D910_05808	PX domain-containing protein. (452 aa)
	D910_03863	PX domain-containing protein. (167 aa)
	D910_03895	PX domain-containing protein. (415 aa)
	D910_08089	PXA domain-containing protein. (445 aa)
	D910_06945	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (929 aa)
	D910_11113	Uncharacterized protein. (983 aa)
	D910_11708	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2794 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_01195	D910_02872	U4TR28	U4TZK6	Uncharacterized protein.	PX domain-containing protein; Belongs to the tetraspanin (TM4SF) family.	0.432
D910_01195	D910_03336	U4TR28	N6TCH1	Uncharacterized protein.	Uncharacterized protein.	0.471
D910_01195	D910_03863	U4TR28	U4U778	Uncharacterized protein.	PX domain-containing protein.	0.459
D910_01195	D910_05691	U4TR28	U4U334	Uncharacterized protein.	PX domain-containing protein.	0.561
D910_01195	D910_08089	U4TR28	U4UCG2	Uncharacterized protein.	PXA domain-containing protein.	0.716
D910_01195	D910_09617	U4TR28	N6T3D5	Uncharacterized protein.	PX domain-containing protein.	0.564
D910_01195	D910_11537	U4TR28	N6TXU9	Uncharacterized protein.	PX domain-containing protein.	0.561
D910_02377	D910_02378	N6U3S4	U4U4R3	AAA_5 domain-containing protein.	VWFA domain-containing protein.	0.910
D910_02378	D910_02377	U4U4R3	N6U3S4	VWFA domain-containing protein.	AAA_5 domain-containing protein.	0.910
D910_02378	D910_03336	U4U4R3	N6TCH1	VWFA domain-containing protein.	Uncharacterized protein.	0.818
D910_02378	D910_03488	U4U4R3	N6TS54	VWFA domain-containing protein.	Uncharacterized protein.	0.648
D910_02378	D910_03863	U4U4R3	U4U778	VWFA domain-containing protein.	PX domain-containing protein.	0.959
D910_02378	D910_03895	U4U4R3	U4U7A6	VWFA domain-containing protein.	PX domain-containing protein.	0.656
D910_02378	D910_05691	U4U4R3	U4U334	VWFA domain-containing protein.	PX domain-containing protein.	0.555
D910_02378	D910_05808	U4U4R3	U4U5U2	VWFA domain-containing protein.	PX domain-containing protein.	0.616
D910_02378	D910_06945	U4U4R3	U4UI68	VWFA domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.985
D910_02378	D910_07606	U4U4R3	N6TII3	VWFA domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.973
D910_02378	D910_08991	U4U4R3	N6TY49	VWFA domain-containing protein.	PX domain-containing protein.	0.698
D910_02378	D910_09617	U4U4R3	N6T3D5	VWFA domain-containing protein.	PX domain-containing protein.	0.930
D910_02378	D910_11537	U4U4R3	N6TXU9	VWFA domain-containing protein.	PX domain-containing protein.	0.577