43 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_03783	Uncharacterized protein. (323 aa)
	D910_05508	Uncharacterized protein. (387 aa)
	D910_05810	Robl_LC7 domain-containing protein. (125 aa)
	D910_11776	Mitochondrial inner membrane protease subunit. (151 aa)
	D910_02808	Uncharacterized protein. (90 aa)
	D910_03650	WD_REPEATS_REGION domain-containing protein. (1270 aa)
	D910_07339	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2421 aa)
	D910_09042	UDENN FLCN/SMCR8-type domain-containing protein. (382 aa)
	D910_10551	Uncharacterized protein. (389 aa)
	D910_01790	Uncharacterized protein. (124 aa)
	D910_04803	Uncharacterized protein. (84 aa)
	D910_12527	Uncharacterized protein. (569 aa)
	D910_08946	DM domain-containing protein. (260 aa)
	D910_06523	Uncharacterized protein. (305 aa)
	D910_12218	Uncharacterized protein. (183 aa)
	D910_12116	Uncharacterized protein. (825 aa)
	D910_03350	Uncharacterized protein. (60 aa)
	D910_02334	Zinc_ribbon_16 domain-containing protein. (783 aa)
	D910_03105	DMA domain-containing protein. (261 aa)
	D910_02335	WD_REPEATS_REGION domain-containing protein. (772 aa)
	D910_02753	Uncharacterized protein. (1409 aa)
	D910_05367	Uncharacterized protein. (315 aa)
	D910_02414	UDENN FNIP1/2-type domain-containing protein. (233 aa)
	D910_05959	Uncharacterized protein. (383 aa)
	D910_07483	Uncharacterized protein. (186 aa)
	D910_08051	Uncharacterized protein. (244 aa)
	D910_04623	Uncharacterized protein. (1107 aa)
	D910_08100	Uncharacterized protein. (1114 aa)
	D910_08817	Uncharacterized protein. (869 aa)
	D910_05846	Rap-GAP domain-containing protein. (1739 aa)
	D910_06916	Uncharacterized protein. (329 aa)
	D910_08903	Protein kinase domain-containing protein. (109 aa)
	D910_09965	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (697 aa)
	D910_11080	Uncharacterized protein. (152 aa)
	D910_07469	DEP domain-containing protein. (1373 aa)
	D910_08053	Uncharacterized protein. (454 aa)
	D910_11922	Uncharacterized protein. (287 aa)
	D910_09111	Uncharacterized protein. (654 aa)
	D910_12115	Uncharacterized protein. (2255 aa)
	D910_10173	Uncharacterized protein. (410 aa)
	D910_11842	Aa_trans domain-containing protein. (304 aa)
	D910_12547	Uncharacterized protein. (345 aa)
	D910_12717	Aa_trans domain-containing protein. (378 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_01790	D910_02334	N6TPH2	N6UKH4	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.594
D910_01790	D910_02335	N6TPH2	U4TVW4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.611
D910_01790	D910_02414	N6TPH2	U4U316	Uncharacterized protein.	UDENN FNIP1/2-type domain-containing protein.	0.741
D910_01790	D910_02808	N6TPH2	N6SZC3	Uncharacterized protein.	Uncharacterized protein.	0.987
D910_01790	D910_03350	N6TPH2	N6UH29	Uncharacterized protein.	Uncharacterized protein.	0.998
D910_01790	D910_03650	N6TPH2	N6SZU7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.986
D910_01790	D910_03783	N6TPH2	J3JXI8	Uncharacterized protein.	Uncharacterized protein.	0.811
D910_01790	D910_05508	N6TPH2	J3JYJ9	Uncharacterized protein.	Uncharacterized protein.	0.835
D910_01790	D910_05810	N6TPH2	J3JZ49	Uncharacterized protein.	Robl_LC7 domain-containing protein.	0.999
D910_01790	D910_05846	N6TPH2	U4UEW8	Uncharacterized protein.	Rap-GAP domain-containing protein.	0.608
D910_01790	D910_05959	N6TPH2	U4U3V7	Uncharacterized protein.	Uncharacterized protein.	0.597
D910_01790	D910_06523	N6TPH2	N6U9F0	Uncharacterized protein.	Uncharacterized protein.	0.996
D910_01790	D910_06916	N6TPH2	U4UG20	Uncharacterized protein.	Uncharacterized protein.	0.531
D910_01790	D910_07339	N6TPH2	N6T0U7	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.819
D910_01790	D910_07469	N6TPH2	U4UJE9	Uncharacterized protein.	DEP domain-containing protein.	0.785
D910_01790	D910_08053	N6TPH2	U4UKK3	Uncharacterized protein.	Uncharacterized protein.	0.531
D910_01790	D910_08100	N6TPH2	U4UEI6	Uncharacterized protein.	Uncharacterized protein.	0.623
D910_01790	D910_08817	N6TPH2	U4UEM6	Uncharacterized protein.	Uncharacterized protein.	0.610
D910_01790	D910_08903	N6TPH2	U4UGU5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.478
D910_01790	D910_09042	N6TPH2	N6T3P5	Uncharacterized protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.873