15 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_12777	MFS domain-containing protein. (626 aa)
	D910_02637	DUF4773 domain-containing protein. (254 aa)
	D910_11327	Uncharacterized protein. (268 aa)
	D910_09637	Uncharacterized protein. (226 aa)
	D910_01985	Uncharacterized protein. (557 aa)
	D910_02062	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (379 aa)
	D910_05476	Uncharacterized protein. (377 aa)
	D910_07496	Uncharacterized protein. (507 aa)
	D910_05475	SSD domain-containing protein. (455 aa)
	D910_06629	PBPe domain-containing protein. (535 aa)
	D910_12595	Uncharacterized protein. (298 aa)
	D910_11119	Uncharacterized protein. (235 aa)
	D910_00264	Uncharacterized protein. (215 aa)
	D910_12596	Uncharacterized protein. (1090 aa)
	D910_00063	CRAL-TRIO domain-containing protein. (122 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00264	D910_05475	U4UNV8	U4UBV5	Uncharacterized protein.	SSD domain-containing protein.	0.772
D910_00264	D910_05476	U4UNV8	U4U4T5	Uncharacterized protein.	Uncharacterized protein.	0.728
D910_00264	D910_11327	U4UNV8	J3JXY2	Uncharacterized protein.	Uncharacterized protein.	0.441
D910_02062	D910_11327	N6TLI0	J3JXY2	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.401
D910_05475	D910_00264	U4UBV5	U4UNV8	SSD domain-containing protein.	Uncharacterized protein.	0.772
D910_05475	D910_05476	U4UBV5	U4U4T5	SSD domain-containing protein.	Uncharacterized protein.	0.940
D910_05476	D910_00264	U4U4T5	U4UNV8	Uncharacterized protein.	Uncharacterized protein.	0.728
D910_05476	D910_05475	U4U4T5	U4UBV5	Uncharacterized protein.	SSD domain-containing protein.	0.940
D910_11327	D910_00264	J3JXY2	U4UNV8	Uncharacterized protein.	Uncharacterized protein.	0.441
D910_11327	D910_02062	J3JXY2	N6TLI0	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.401
D910_12595	D910_12596	U4UMP3	U4UYE7	Uncharacterized protein.	Uncharacterized protein.	0.651
D910_12596	D910_12595	U4UYE7	U4UMP3	Uncharacterized protein.	Uncharacterized protein.	0.651