45 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_09673	Aa_trans domain-containing protein. (457 aa)
	D910_01214	C2 domain-containing protein. (160 aa)
	D910_10014	Uncharacterized protein. (187 aa)
	D910_02772	Uncharacterized protein. (324 aa)
	D910_12117	MARVEL domain-containing protein. (209 aa)
	D910_00890	Uncharacterized protein. (278 aa)
	D910_10011	Uncharacterized protein. (218 aa)
	D910_10416	Uncharacterized protein. (86 aa)
	D910_07874	Uncharacterized protein. (318 aa)
	D910_01592	Aa_trans domain-containing protein. (159 aa)
	D910_01591	Uncharacterized protein. (469 aa)
	D910_02774	Uncharacterized protein. (918 aa)
	D910_01613	Uncharacterized protein. (128 aa)
	D910_03006	MFS domain-containing protein. (418 aa)
	D910_00660	MFS domain-containing protein. (153 aa)
	D910_00834	Uncharacterized protein. (1581 aa)
	D910_01590	Uncharacterized protein. (126 aa)
	D910_01897	MFS domain-containing protein. (495 aa)
	D910_02206	Uncharacterized protein. (1072 aa)
	D910_06081	Uncharacterized protein. (1335 aa)
	D910_03617	Uncharacterized protein. (250 aa)
	D910_05740	Uncharacterized protein. (269 aa)
	D910_05764	C2 domain-containing protein. (116 aa)
	D910_05180	SH3 domain-containing protein. (561 aa)
	D910_01283	Uncharacterized protein. (129 aa)
	D910_07875	PDZ domain-containing protein. (208 aa)
	D910_08949	MFS domain-containing protein. (454 aa)
	D910_05738	Synapsin_C domain-containing protein. (282 aa)
	D910_01135	C2 domain-containing protein. (156 aa)
	D910_05179	Uncharacterized protein. (489 aa)
	D910_07876	Uncharacterized protein. (490 aa)
	D910_00475	Uncharacterized protein. (187 aa)
	D910_10013	Uncharacterized protein. (207 aa)
	D910_10920	Uncharacterized protein. (871 aa)
	D910_10415	Uncharacterized protein. (1062 aa)
	D910_11068	Uncharacterized protein. (451 aa)
	D910_09358	Uncharacterized protein. (519 aa)
	D910_10012	Uncharacterized protein. (797 aa)
	D910_10177	Uncharacterized protein. (1178 aa)
	D910_10176	Uncharacterized protein. (108 aa)
	D910_10672	Uncharacterized protein. (549 aa)
	D910_10919	Uncharacterized protein. (142 aa)
	D910_11655	MFS domain-containing protein. (346 aa)
	D910_00051	BH4_AAA_HYDROXYL_2 domain-containing protein. (352 aa)
	D910_00140	Uncharacterized protein. (77 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00051	D910_11655	U4UYZ8	U4UVZ0	BH4_AAA_HYDROXYL_2 domain-containing protein.	MFS domain-containing protein.	0.605
D910_00051	D910_12117	U4UYZ8	N6TII9	BH4_AAA_HYDROXYL_2 domain-containing protein.	MARVEL domain-containing protein.	0.433
D910_00140	D910_00475	U4UZ75	U4UGR0	Uncharacterized protein.	Uncharacterized protein.	0.404
D910_00140	D910_00660	U4UZ75	U4TZ37	Uncharacterized protein.	MFS domain-containing protein.	0.456
D910_00140	D910_00834	U4UZ75	U4TZI3	Uncharacterized protein.	Uncharacterized protein.	0.452
D910_00140	D910_01283	U4UZ75	U4UB36	Uncharacterized protein.	Uncharacterized protein.	0.933
D910_00140	D910_01590	U4UZ75	U4U0X7	Uncharacterized protein.	Uncharacterized protein.	0.436
D910_00140	D910_01591	U4UZ75	U4TTW9	Uncharacterized protein.	Uncharacterized protein.	0.436
D910_00140	D910_01592	U4UZ75	U4TRV9	Uncharacterized protein.	Aa_trans domain-containing protein.	0.433
D910_00140	D910_01613	U4UZ75	U4TW84	Uncharacterized protein.	Uncharacterized protein.	0.436
D910_00140	D910_02206	U4UZ75	U4U2F4	Uncharacterized protein.	Uncharacterized protein.	0.497
D910_00140	D910_02772	U4UZ75	N6TGV1	Uncharacterized protein.	Uncharacterized protein.	0.401
D910_00140	D910_02774	U4UZ75	U4TUZ7	Uncharacterized protein.	Uncharacterized protein.	0.401
D910_00140	D910_03006	U4UZ75	U4TXQ2	Uncharacterized protein.	MFS domain-containing protein.	0.456
D910_00140	D910_05179	U4UZ75	U4UCW2	Uncharacterized protein.	Uncharacterized protein.	0.488
D910_00140	D910_05180	U4UZ75	U4UB12	Uncharacterized protein.	SH3 domain-containing protein.	0.488
D910_00140	D910_05738	U4UZ75	U4UCQ6	Uncharacterized protein.	Synapsin_C domain-containing protein.	0.534
D910_00140	D910_05740	U4UZ75	U4U7R1	Uncharacterized protein.	Uncharacterized protein.	0.534
D910_00140	D910_05764	U4UZ75	U4U7T4	Uncharacterized protein.	C2 domain-containing protein.	0.478
D910_00140	D910_06081	U4UZ75	U4U462	Uncharacterized protein.	Uncharacterized protein.	0.989