19 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_12397	Ubiquitin-like domain-containing protein. (129 aa)
	D910_02350	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (186 aa)
	D910_03202	UBIQUITIN_CONJUGAT_2 domain-containing protein. (144 aa)
	D910_10346	UBIQUITIN_CONJUGAT_2 domain-containing protein. (144 aa)
	D910_02318	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
	D910_03539	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
	D910_12133	PDZ domain-containing protein. (607 aa)
	D910_07882	Ubiquitin-like domain-containing protein. (356 aa)
	D910_10157	OTU domain-containing protein. (270 aa)
	D910_03070	UBIQUITIN_CONJUGAT_2 domain-containing protein. (2950 aa)
	D910_04764	N_BRCA1_IG domain-containing protein. (908 aa)
	D910_03140	Uncharacterized protein. (1547 aa)
	D910_07582	Uncharacterized protein. (433 aa)
	D910_09566	RING-type domain-containing protein. (300 aa)
	D910_12418	Uncharacterized protein. (467 aa)
	D910_12511	Uncharacterized protein. (986 aa)
	D910_12419	Ubiquitin-like domain-containing protein. (194 aa)
	D910_01031	Uncharacterized protein. (846 aa)
	D910_01256	Uncharacterized protein. (862 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_01031	D910_01256	U4V091	U4V0F0	Uncharacterized protein.	Uncharacterized protein.	0.629
D910_01031	D910_02318	U4V091	N6TA90	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.777
D910_01031	D910_02350	U4V091	J3JVD8	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.777
D910_01031	D910_03070	U4V091	U4U027	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.975
D910_01031	D910_03140	U4V091	U4U6Y6	Uncharacterized protein.	Uncharacterized protein.	0.905
D910_01031	D910_03202	U4V091	J3JVY9	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.970
D910_01031	D910_03539	U4V091	N6U6Q5	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.777
D910_01031	D910_07582	U4V091	U4U8H7	Uncharacterized protein.	Uncharacterized protein.	0.520
D910_01031	D910_07882	U4V091	N6UJK5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.896
D910_01031	D910_09566	U4V091	U4UE45	Uncharacterized protein.	RING-type domain-containing protein.	0.419
D910_01031	D910_10157	U4V091	N6UKN8	Uncharacterized protein.	OTU domain-containing protein.	0.658
D910_01031	D910_10346	U4V091	N6SV81	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.970
D910_01031	D910_12133	U4V091	N6U797	Uncharacterized protein.	PDZ domain-containing protein.	0.911
D910_01031	D910_12397	U4V091	J3JTE2	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.981
D910_01031	D910_12418	U4V091	U4UM46	Uncharacterized protein.	Uncharacterized protein.	0.981
D910_01031	D910_12419	U4V091	U4UXW8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.993
D910_01031	D910_12511	U4V091	U4UMD7	Uncharacterized protein.	Uncharacterized protein.	0.726
D910_01256	D910_01031	U4V0F0	U4V091	Uncharacterized protein.	Uncharacterized protein.	0.629
D910_01256	D910_02318	U4V0F0	N6TA90	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.777
D910_01256	D910_02350	U4V0F0	J3JVD8	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.777