8 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_12133	PDZ domain-containing protein. (607 aa)
	D910_03070	UBIQUITIN_CONJUGAT_2 domain-containing protein. (2950 aa)
	D910_03140	Uncharacterized protein. (1547 aa)
	D910_12418	Uncharacterized protein. (467 aa)
	D910_12511	Uncharacterized protein. (986 aa)
	D910_12419	Ubiquitin-like domain-containing protein. (194 aa)
	D910_01031	Uncharacterized protein. (846 aa)
	D910_01256	Uncharacterized protein. (862 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_01031	D910_01256	U4V091	U4V0F0	Uncharacterized protein.	Uncharacterized protein.	0.629
D910_01031	D910_03070	U4V091	U4U027	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.975
D910_01031	D910_03140	U4V091	U4U6Y6	Uncharacterized protein.	Uncharacterized protein.	0.905
D910_01031	D910_12133	U4V091	N6U797	Uncharacterized protein.	PDZ domain-containing protein.	0.911
D910_01031	D910_12418	U4V091	U4UM46	Uncharacterized protein.	Uncharacterized protein.	0.981
D910_01031	D910_12419	U4V091	U4UXW8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.993
D910_01031	D910_12511	U4V091	U4UMD7	Uncharacterized protein.	Uncharacterized protein.	0.726
D910_01256	D910_01031	U4V0F0	U4V091	Uncharacterized protein.	Uncharacterized protein.	0.629
D910_01256	D910_03070	U4V0F0	U4U027	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.975
D910_01256	D910_03140	U4V0F0	U4U6Y6	Uncharacterized protein.	Uncharacterized protein.	0.905
D910_01256	D910_12133	U4V0F0	N6U797	Uncharacterized protein.	PDZ domain-containing protein.	0.911
D910_01256	D910_12418	U4V0F0	U4UM46	Uncharacterized protein.	Uncharacterized protein.	0.981
D910_01256	D910_12419	U4V0F0	U4UXW8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.993
D910_01256	D910_12511	U4V0F0	U4UMD7	Uncharacterized protein.	Uncharacterized protein.	0.726
D910_03070	D910_01031	U4U027	U4V091	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.975
D910_03070	D910_01256	U4U027	U4V0F0	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.975
D910_03070	D910_03140	U4U027	U4U6Y6	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.905
D910_03070	D910_12133	U4U027	N6U797	UBIQUITIN_CONJUGAT_2 domain-containing protein.	PDZ domain-containing protein.	0.911
D910_03070	D910_12418	U4U027	U4UM46	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.981
D910_03070	D910_12419	U4U027	U4UXW8	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.993