44 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_00307	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
	D910_09826	RPOLD domain-containing protein. (275 aa)
	D910_08322	Spt4 domain-containing protein. (116 aa)
	D910_00945	Uncharacterized protein. (157 aa)
	D910_03171	Uncharacterized protein. (59 aa)
	D910_09350	Uncharacterized protein. (520 aa)
	D910_10835	Uncharacterized protein. (1133 aa)
	D910_10215	Plus3 domain-containing protein. (736 aa)
	D910_09019	HMG box domain-containing protein. (101 aa)
	D910_00777	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1699 aa)
	D910_02271	SHS2_Rpb7-N domain-containing protein. (94 aa)
	D910_03267	Uncharacterized protein. (1366 aa)
	D910_03312	S1 motif domain-containing protein. (316 aa)
	D910_02533	PWWP domain-containing protein. (611 aa)
	D910_04420	AHD domain-containing protein. (729 aa)
	D910_06231	RNA_pol_L_2 domain-containing protein. (72 aa)
	D910_03063	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1871 aa)
	D910_03404	Uncharacterized protein. (459 aa)
	D910_06095	Uncharacterized protein. (617 aa)
	D910_05244	EAF domain-containing protein. (348 aa)
	D910_05259	Uncharacterized protein. (319 aa)
	D910_01209	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1429 aa)
	D910_04882	Uncharacterized protein. (1054 aa)
	D910_00756	Uncharacterized protein; Belongs to the cyclin family. (380 aa)
	D910_09331	Uncharacterized protein. (520 aa)
	D910_06163	CYCLIN domain-containing protein; Belongs to the cyclin family. (1227 aa)
	D910_06309	Mucin-like domain-containing protein. (372 aa)
	D910_09917	Uncharacterized protein. (262 aa)
	D910_09117	Uncharacterized protein. (546 aa)
	D910_10461	Uncharacterized protein. (241 aa)
	D910_09133	Uncharacterized protein. (1121 aa)
	D910_07520	ELL domain-containing protein. (349 aa)
	D910_07544	Protein kinase domain-containing protein. (1257 aa)
	D910_08047	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (204 aa)
	D910_11138	Uncharacterized protein. (1005 aa)
	D910_11379	Uncharacterized protein. (723 aa)
	D910_12741	Transcription elongation factor SPT5. (1058 aa)
	D910_12589	TPR_REGION domain-containing protein. (1134 aa)
	D910_01681	Uncharacterized protein. (159 aa)
	D910_10289	TFIIS N-terminal domain-containing protein. (227 aa)
	D910_11136	Uncharacterized protein. (840 aa)
	D910_11758	Uncharacterized protein. (381 aa)
	D910_11757	Uncharacterized protein. (271 aa)
	D910_00956	Cyclin N-terminal domain-containing protein. (727 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00307	D910_00756	J3JUM6	U4UCH6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein; Belongs to the cyclin family.	0.683
D910_00307	D910_00777	J3JUM6	U4TUM8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.915
D910_00307	D910_00945	J3JUM6	N6TPT6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.856
D910_00307	D910_00956	J3JUM6	U4V0A7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Cyclin N-terminal domain-containing protein.	0.596
D910_00307	D910_01209	J3JUM6	U4UBL6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
D910_00307	D910_01681	J3JUM6	U4US35	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.832
D910_00307	D910_02271	J3JUM6	U4TVQ3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	SHS2_Rpb7-N domain-containing protein.	0.999
D910_00307	D910_03063	J3JUM6	U4U4W4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
D910_00307	D910_03171	J3JUM6	N6TSR1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.999
D910_00307	D910_03267	J3JUM6	U4TYG0	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.679
D910_00307	D910_03312	J3JUM6	U4TYJ9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	S1 motif domain-containing protein.	0.501
D910_00307	D910_03404	J3JUM6	U4U7R8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.883
D910_00307	D910_04420	J3JUM6	U4U3W3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	AHD domain-containing protein.	0.738
D910_00307	D910_04882	J3JUM6	U4UC13	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.896
D910_00307	D910_05244	J3JUM6	U4UBA0	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	EAF domain-containing protein.	0.891
D910_00307	D910_05259	J3JUM6	U4UBB2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.679
D910_00307	D910_06095	J3JUM6	U4U8N1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.909
D910_00307	D910_06163	J3JUM6	U4UDW2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.596
D910_00307	D910_06231	J3JUM6	U4U4Q0	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RNA_pol_L_2 domain-containing protein.	0.999
D910_00307	D910_06309	J3JUM6	U4UEB6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Mucin-like domain-containing protein.	0.679