STRINGSTRING
D910_12618 D910_12618 D910_06473 D910_06473 D910_01956 D910_01956 D910_09068 D910_09068 D910_04161 D910_04161 D910_00307 D910_00307 D910_11732 D910_11732 D910_06732 D910_06732 D910_00238 D910_00238 D910_02476 D910_02476 D910_10131 D910_10131 D910_05648 D910_05648 D910_09826 D910_09826 D910_02731 D910_02731 D910_04240 D910_04240 D910_12183 D910_12183 D910_03266 D910_03266 D910_07771 D910_07771 D910_08713 D910_08713 D910_08311 D910_08311 D910_04274 D910_04274 D910_00955 D910_00955 D910_08322 D910_08322 D910_11588 D910_11588 D910_01058 D910_01058 D910_04566 D910_04566 D910_08075 D910_08075 D910_11979 D910_11979 D910_11062 D910_11062 D910_06494 D910_06494 D910_03618 D910_03618 D910_01093 D910_01093 D910_07530 D910_07530 D910_03642 D910_03642 D910_03171 D910_03171 D910_06928 D910_06928 D910_08273 D910_08273 D910_09694 D910_09694 D910_10601 D910_10601 D910_04576 D910_04576 D910_11518 D910_11518 D910_08218 D910_08218 D910_07992 D910_07992 D910_02732 D910_02732 D910_07942 D910_07942 D910_07991 D910_07991 D910_10835 D910_10835 D910_06963 D910_06963 D910_06202 D910_06202 D910_02730 D910_02730 D910_08486 D910_08486 D910_11819 D910_11819 D910_12404 D910_12404 D910_06656 D910_06656 D910_01211 D910_01211 D910_00667 D910_00667 D910_00925 D910_00925 D910_01240 D910_01240 D910_01298 D910_01298 D910_00500 D910_00500 D910_00777 D910_00777 D910_02271 D910_02271 D910_03259 D910_03259 D910_03908 D910_03908 D910_00378 D910_00378 D910_00691 D910_00691 D910_03619 D910_03619 D910_04405 D910_04405 D910_00385 D910_00385 D910_03934 D910_03934 D910_01272 D910_01272 D910_04420 D910_04420 D910_05300 D910_05300 D910_06231 D910_06231 D910_03063 D910_03063 D910_03141 D910_03141 D910_05947 D910_05947 D910_05316 D910_05316 D910_06114 D910_06114 D910_06179 D910_06179 D910_03404 D910_03404 D910_05854 D910_05854 D910_04379 D910_04379 D910_06180 D910_06180 D910_06957 D910_06957 D910_07847 D910_07847 D910_08061 D910_08061 D910_08219 D910_08219 D910_05229 D910_05229 D910_01209 D910_01209 D910_04755 D910_04755 D910_07174 D910_07174 D910_07302 D910_07302 D910_08217 D910_08217 D910_09193 D910_09193 D910_08314 D910_08314 D910_09262 D910_09262 D910_06163 D910_06163 D910_07990 D910_07990 D910_05955 D910_05955 D910_08858 D910_08858 D910_10461 D910_10461 D910_10565 D910_10565 D910_06653 D910_06653 D910_07520 D910_07520 D910_09438 D910_09438 D910_09620 D910_09620 D910_11264 D910_11264 D910_07544 D910_07544 D910_11751 D910_11751 D910_10170 D910_10170 D910_07848 D910_07848 D910_08033 D910_08033 D910_08047 D910_08047 D910_08196 D910_08196 D910_11379 D910_11379 D910_12741 D910_12741 D910_09003 D910_09003 D910_11430 D910_11430 D910_09553 D910_09553 D910_09929 D910_09929 D910_00301 D910_00301 D910_01681 D910_01681 D910_10677 D910_10677 D910_10977 D910_10977 D910_11127 D910_11127 D910_11752 D910_11752 D910_11833 D910_11833 D910_00639 D910_00639 D910_00956 D910_00956
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D910_12618General transcription factor IIH subunit. (395 aa)
D910_06473Uncharacterized protein. (131 aa)
D910_01956Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
D910_09068Uncharacterized protein. (210 aa)
D910_04161TAFII28 domain-containing protein. (224 aa)
D910_00307DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
D910_11732Ubiquitin-like domain-containing protein. (117 aa)
D910_06732Uncharacterized protein. (318 aa)
D910_00238Uncharacterized protein. (234 aa)
D910_02476Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (292 aa)
D910_10131General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (265 aa)
D910_05648Uncharacterized protein. (207 aa)
D910_09826RPOLD domain-containing protein. (275 aa)
D910_02731Uncharacterized protein. (195 aa)
D910_04240Uncharacterized protein. (215 aa)
D910_12183TFIIB-type domain-containing protein. (315 aa)
D910_03266Uncharacterized protein. (435 aa)
D910_07771TFIIB-type domain-containing protein. (192 aa)
D910_08713Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (118 aa)
D910_08311Uncharacterized protein. (209 aa)
D910_04274Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (506 aa)
D910_00955Uncharacterized protein. (287 aa)
D910_08322Spt4 domain-containing protein. (116 aa)
D910_11588Uncharacterized protein. (317 aa)
D910_01058CBFD_NFYB_HMF domain-containing protein. (177 aa)
D910_04566Uncharacterized protein. (128 aa)
D910_08075Uncharacterized protein. (509 aa)
D910_11979Uncharacterized protein. (113 aa)
D910_11062TAFII55_N domain-containing protein. (375 aa)
D910_06494RNA_pol_L_2 domain-containing protein. (100 aa)
D910_03618Uncharacterized protein. (210 aa)
D910_01093Uncharacterized protein. (768 aa)
D910_07530Uncharacterized protein. (305 aa)
D910_03642BTP domain-containing protein. (291 aa)
D910_03171Uncharacterized protein. (59 aa)
D910_06928RING-type domain-containing protein. (313 aa)
D910_08273Uncharacterized protein. (116 aa)
D910_09694RTR1-type domain-containing protein. (561 aa)
D910_10601TAFH domain-containing protein. (787 aa)
D910_04576Uncharacterized protein. (610 aa)
D910_11518Uncharacterized protein. (405 aa)
D910_08218RPOLD domain-containing protein. (338 aa)
D910_07992Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1589 aa)
D910_02732Uncharacterized protein. (301 aa)
D910_07942Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (82 aa)
D910_07991Med13_N domain-containing protein. (328 aa)
D910_10835Uncharacterized protein. (1133 aa)
D910_06963Helicase ATP-binding domain-containing protein. (762 aa)
D910_06202Uncharacterized protein. (268 aa)
D910_02730Uncharacterized protein. (104 aa)
D910_08486DNA-directed RNA polymerase subunit. (120 aa)
D910_11819PCI domain-containing protein. (393 aa)
D910_12404Uncharacterized protein. (753 aa)
D910_06656Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (339 aa)
D910_01211Uncharacterized protein. (333 aa)
D910_00667Uncharacterized protein. (185 aa)
D910_00925Peptidase_M1 domain-containing protein. (221 aa)
D910_01240DUF2236 domain-containing protein. (390 aa)
D910_01298Uncharacterized protein. (673 aa)
D910_00500Uncharacterized protein. (421 aa)
D910_00777Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1699 aa)
D910_02271SHS2_Rpb7-N domain-containing protein. (94 aa)
D910_03259Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (273 aa)
D910_03908Uncharacterized protein. (399 aa)
D910_00378Uncharacterized protein. (107 aa)
D910_00691CYCLIN domain-containing protein. (465 aa)
D910_03619Uncharacterized protein. (1404 aa)
D910_04405TAF domain-containing protein. (617 aa)
D910_00385RRM domain-containing protein. (551 aa)
D910_03934Uncharacterized protein. (352 aa)
D910_01272Uncharacterized protein. (190 aa)
D910_04420AHD domain-containing protein. (729 aa)
D910_05300TAFII55_N domain-containing protein. (290 aa)
D910_06231RNA_pol_L_2 domain-containing protein. (72 aa)
D910_03063DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1871 aa)
D910_03141TAF6_C domain-containing protein. (293 aa)
D910_05947RPOL4c domain-containing protein. (134 aa)
D910_05316Uncharacterized protein. (1847 aa)
D910_06114rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (663 aa)
D910_06179Uncharacterized protein. (313 aa)
D910_03404Uncharacterized protein. (459 aa)
D910_05854DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1127 aa)
D910_04379Uncharacterized protein. (369 aa)
D910_06180DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (911 aa)
D910_06957Helicase ATP-binding domain-containing protein. (738 aa)
D910_07847CID domain-containing protein. (169 aa)
D910_08061HTH TFE/IIEalpha-type domain-containing protein. (404 aa)
D910_08219SANT domain-containing protein. (693 aa)
D910_05229Uncharacterized protein. (820 aa)
D910_01209DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1429 aa)
D910_04755Uncharacterized protein. (1146 aa)
D910_07174Uncharacterized protein. (221 aa)
D910_07302Uncharacterized protein. (532 aa)
D910_08217CYCLIN domain-containing protein; Belongs to the cyclin family. (328 aa)
D910_09193Uncharacterized protein. (1151 aa)
D910_08314Uncharacterized protein. (293 aa)
D910_09262DIRP domain-containing protein. (576 aa)
D910_06163CYCLIN domain-containing protein; Belongs to the cyclin family. (1227 aa)
D910_07990Uncharacterized protein. (149 aa)
D910_05955Uncharacterized protein. (808 aa)
D910_08858WD_REPEATS_REGION domain-containing protein. (629 aa)
D910_10461Uncharacterized protein. (241 aa)
D910_10565Uncharacterized protein. (189 aa)
D910_06653DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1331 aa)
D910_07520ELL domain-containing protein. (349 aa)
D910_09438DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1547 aa)
D910_09620DUF2236 domain-containing protein. (331 aa)
D910_11264Uncharacterized protein. (532 aa)
D910_07544Protein kinase domain-containing protein. (1257 aa)
D910_11751Uncharacterized protein. (145 aa)
D910_10170RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (514 aa)
D910_07848RRM domain-containing protein. (562 aa)
D910_08033Uncharacterized protein. (456 aa)
D910_08047Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (204 aa)
D910_08196Uncharacterized protein. (290 aa)
D910_11379Uncharacterized protein. (723 aa)
D910_12741Transcription elongation factor SPT5. (1058 aa)
D910_09003Uncharacterized protein. (300 aa)
D910_11430Uncharacterized protein. (1103 aa)
D910_09553Uncharacterized protein. (1727 aa)
D910_09929General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (475 aa)
D910_00301RNA_pol_Rpb2_6 domain-containing protein. (211 aa)
D910_01681Uncharacterized protein. (159 aa)
D910_10677Uncharacterized protein. (386 aa)
D910_10977TFIID_20kDa domain-containing protein. (231 aa)
D910_11127Uncharacterized protein. (444 aa)
D910_11752Ski_Sno domain-containing protein. (246 aa)
D910_11833DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1091 aa)
D910_00639Peptidase_M1 domain-containing protein. (202 aa)
D910_00956Cyclin N-terminal domain-containing protein. (727 aa)
Your Current Organism:
Dendroctonus ponderosae
NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle
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