16 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_09068	Uncharacterized protein. (210 aa)
	D910_03171	Uncharacterized protein. (59 aa)
	D910_08273	Uncharacterized protein. (116 aa)
	D910_04576	Uncharacterized protein. (610 aa)
	D910_08218	RPOLD domain-containing protein. (338 aa)
	D910_06202	Uncharacterized protein. (268 aa)
	D910_08486	DNA-directed RNA polymerase subunit. (120 aa)
	D910_05854	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1127 aa)
	D910_09438	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1547 aa)
	D910_06473	Uncharacterized protein. (131 aa)
	D910_11264	Uncharacterized protein. (532 aa)
	D910_00301	RNA_pol_Rpb2_6 domain-containing protein. (211 aa)
	D910_10677	Uncharacterized protein. (386 aa)
	D910_11127	Uncharacterized protein. (444 aa)
	D910_01093	Uncharacterized protein. (768 aa)
	D910_06494	RNA_pol_L_2 domain-containing protein. (100 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00301	D910_01093	U4URQ1	N6TPW3	RNA_pol_Rpb2_6 domain-containing protein.	Uncharacterized protein.	0.958
D910_00301	D910_03171	U4URQ1	N6TSR1	RNA_pol_Rpb2_6 domain-containing protein.	Uncharacterized protein.	0.961
D910_00301	D910_04576	U4URQ1	N6U031	RNA_pol_Rpb2_6 domain-containing protein.	Uncharacterized protein.	0.968
D910_00301	D910_06473	U4URQ1	J3JU72	RNA_pol_Rpb2_6 domain-containing protein.	Uncharacterized protein.	0.984
D910_00301	D910_06494	U4URQ1	N6TKN9	RNA_pol_Rpb2_6 domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.941
D910_00301	D910_08218	U4URQ1	N6U2F2	RNA_pol_Rpb2_6 domain-containing protein.	RPOLD domain-containing protein.	0.988
D910_00301	D910_08273	U4URQ1	N6TU50	RNA_pol_Rpb2_6 domain-containing protein.	Uncharacterized protein.	0.964
D910_00301	D910_08486	U4URQ1	N6UG87	RNA_pol_Rpb2_6 domain-containing protein.	DNA-directed RNA polymerase subunit.	0.973
D910_00301	D910_09068	U4URQ1	J3JUD2	RNA_pol_Rpb2_6 domain-containing protein.	Uncharacterized protein.	0.978
D910_00301	D910_09438	U4URQ1	U4UIC8	RNA_pol_Rpb2_6 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
D910_00301	D910_10677	U4URQ1	U4UTD8	RNA_pol_Rpb2_6 domain-containing protein.	Uncharacterized protein.	0.984
D910_00301	D910_11127	U4URQ1	U4UUJ1	RNA_pol_Rpb2_6 domain-containing protein.	Uncharacterized protein.	0.958
D910_00301	D910_11264	U4URQ1	U4UIV1	RNA_pol_Rpb2_6 domain-containing protein.	Uncharacterized protein.	0.836
D910_01093	D910_00301	N6TPW3	U4URQ1	Uncharacterized protein.	RNA_pol_Rpb2_6 domain-containing protein.	0.958
D910_01093	D910_03171	N6TPW3	N6TSR1	Uncharacterized protein.	Uncharacterized protein.	0.953
D910_01093	D910_04576	N6TPW3	N6U031	Uncharacterized protein.	Uncharacterized protein.	0.966
D910_01093	D910_05854	N6TPW3	U4U813	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.958
D910_01093	D910_06473	N6TPW3	J3JU72	Uncharacterized protein.	Uncharacterized protein.	0.968
D910_01093	D910_06494	N6TPW3	N6TKN9	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.961
D910_01093	D910_08218	N6TPW3	N6U2F2	Uncharacterized protein.	RPOLD domain-containing protein.	0.981