25 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_10608	Cbl-PTB domain-containing protein. (181 aa)
	D910_08803	Uncharacterized protein. (321 aa)
	D910_09418	Uncharacterized protein. (973 aa)
	D910_08720	Uncharacterized protein. (211 aa)
	D910_05452	Ig-like domain-containing protein. (657 aa)
	D910_05959	Uncharacterized protein. (383 aa)
	D910_12827	Uncharacterized protein. (2129 aa)
	D910_00083	Uncharacterized protein. (239 aa)
	D910_08630	Uncharacterized protein. (308 aa)
	D910_01304	Uncharacterized protein. (316 aa)
	D910_12146	Uncharacterized protein. (229 aa)
	D910_10017	Uncharacterized protein. (289 aa)
	D910_06177	Uncharacterized protein. (501 aa)
	D910_03754	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (160 aa)
	D910_02763	Uncharacterized protein. (359 aa)
	D910_11301	Uncharacterized protein. (190 aa)
	D910_01879	Uncharacterized protein. (784 aa)
	D910_01503	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (152 aa)
	D910_03928	Uncharacterized protein. (1152 aa)
	D910_01567	PPM-type phosphatase domain-containing protein. (270 aa)
	D910_10372	Uncharacterized protein. (349 aa)
	D910_00588	PNPLA domain-containing protein. (216 aa)
	D910_08688	Uncharacterized protein. (389 aa)
	D910_07430	FYVE-type domain-containing protein. (781 aa)
	D910_00322	Wee1-like protein kinase. (519 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00083	D910_10608	U4UT05	U4UH44	Uncharacterized protein.	Cbl-PTB domain-containing protein.	0.929
D910_00588	D910_09418	U4UPA8	U4UGD9	PNPLA domain-containing protein.	Uncharacterized protein.	0.831
D910_01503	D910_06177	N6UJ54	N6TXU5	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Uncharacterized protein.	0.568
D910_06177	D910_01503	N6TXU5	N6UJ54	Uncharacterized protein.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.568
D910_06177	D910_12827	N6TXU5	U4UYT9	Uncharacterized protein.	Uncharacterized protein.	0.409
D910_08630	D910_12827	J3JY11	U4UYT9	Uncharacterized protein.	Uncharacterized protein.	0.417
D910_08688	D910_08803	U4UMJ4	U4UGK2	Uncharacterized protein.	Uncharacterized protein.	0.455
D910_08803	D910_08688	U4UGK2	U4UMJ4	Uncharacterized protein.	Uncharacterized protein.	0.455
D910_09418	D910_00588	U4UGD9	U4UPA8	Uncharacterized protein.	PNPLA domain-containing protein.	0.831
D910_10608	D910_00083	U4UH44	U4UT05	Cbl-PTB domain-containing protein.	Uncharacterized protein.	0.929
D910_11301	D910_12827	N6UE84	U4UYT9	Uncharacterized protein.	Uncharacterized protein.	0.417
D910_12827	D910_06177	U4UYT9	N6TXU5	Uncharacterized protein.	Uncharacterized protein.	0.409
D910_12827	D910_08630	U4UYT9	J3JY11	Uncharacterized protein.	Uncharacterized protein.	0.417
D910_12827	D910_11301	U4UYT9	N6UE84	Uncharacterized protein.	Uncharacterized protein.	0.417