19 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_09370	Uncharacterized protein. (3272 aa)
	D910_09870	VPS37 C-terminal domain-containing protein. (236 aa)
	D910_04847	RING-type domain-containing protein. (1173 aa)
	D910_11390	Uncharacterized protein. (359 aa)
	D910_09446	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (929 aa)
	D910_10483	GRIP domain-containing protein. (1247 aa)
	D910_11250	Pep3_Vps18 domain-containing protein. (947 aa)
	D910_11392	Uncharacterized protein. (1037 aa)
	D910_12738	Uncharacterized protein. (816 aa)
	D910_12827	Uncharacterized protein. (2129 aa)
	D910_04647	Uncharacterized protein. (3873 aa)
	D910_04373	E3 ubiquitin-protein ligase. (858 aa)
	D910_04551	Uncharacterized protein. (1503 aa)
	D910_02761	Uncharacterized protein. (4044 aa)
	D910_03084	RING-type domain-containing protein. (831 aa)
	D910_08804	PX domain-containing protein. (286 aa)
	D910_10059	Uncharacterized protein. (481 aa)
	D910_11389	Uncharacterized protein. (1320 aa)
	D910_11391	Uncharacterized protein. (274 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_02761	D910_04647	U4U445	U4UBA7	Uncharacterized protein.	Uncharacterized protein.	0.462
D910_03084	D910_09446	U4TXX4	U4UPP7	RING-type domain-containing protein.	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	0.586
D910_03084	D910_12738	U4TXX4	U4UYK7	RING-type domain-containing protein.	Uncharacterized protein.	0.459
D910_04551	D910_11250	U4U953	U4UUW1	Uncharacterized protein.	Pep3_Vps18 domain-containing protein.	0.565
D910_04647	D910_02761	U4UBA7	U4U445	Uncharacterized protein.	Uncharacterized protein.	0.462
D910_04847	D910_10059	U4UBY3	N6SZB5	RING-type domain-containing protein.	Uncharacterized protein.	0.698
D910_04847	D910_11250	U4UBY3	U4UUW1	RING-type domain-containing protein.	Pep3_Vps18 domain-containing protein.	0.993
D910_04847	D910_12738	U4UBY3	U4UYK7	RING-type domain-containing protein.	Uncharacterized protein.	0.774
D910_09446	D910_03084	U4UPP7	U4TXX4	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	RING-type domain-containing protein.	0.586
D910_09446	D910_12738	U4UPP7	U4UYK7	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	Uncharacterized protein.	0.808
D910_09446	D910_12827	U4UPP7	U4UYT9	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	Uncharacterized protein.	0.918
D910_10059	D910_04847	N6SZB5	U4UBY3	Uncharacterized protein.	RING-type domain-containing protein.	0.698
D910_10059	D910_11250	N6SZB5	U4UUW1	Uncharacterized protein.	Pep3_Vps18 domain-containing protein.	0.752
D910_10059	D910_12738	N6SZB5	U4UYK7	Uncharacterized protein.	Uncharacterized protein.	0.974
D910_11250	D910_04551	U4UUW1	U4U953	Pep3_Vps18 domain-containing protein.	Uncharacterized protein.	0.565
D910_11250	D910_04847	U4UUW1	U4UBY3	Pep3_Vps18 domain-containing protein.	RING-type domain-containing protein.	0.993
D910_11250	D910_10059	U4UUW1	N6SZB5	Pep3_Vps18 domain-containing protein.	Uncharacterized protein.	0.752
D910_11250	D910_12738	U4UUW1	U4UYK7	Pep3_Vps18 domain-containing protein.	Uncharacterized protein.	0.995
D910_11389	D910_11390	U4ULV9	U4UNQ1	Uncharacterized protein.	Uncharacterized protein.	0.938
D910_11389	D910_11391	U4ULV9	U4UJ58	Uncharacterized protein.	Uncharacterized protein.	0.915