54 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_08956	Protein kinase domain-containing protein. (297 aa)
	D910_12071	Uncharacterized protein. (184 aa)
	D910_09171	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (905 aa)
	D910_02924	Uncharacterized protein. (812 aa)
	D910_05848	GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins. (876 aa)
	D910_02567	GOLD domain-containing protein. (218 aa)
	D910_04039	t-SNARE coiled-coil homology domain-containing protein. (108 aa)
	D910_04485	Metallophos domain-containing protein. (355 aa)
	D910_03913	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (302 aa)
	D910_03319	GOLD domain-containing protein. (189 aa)
	D910_02739	Rab-GAP TBC domain-containing protein. (411 aa)
	D910_02556	Sec16 domain-containing protein. (1717 aa)
	D910_01924	Uncharacterized protein. (317 aa)
	D910_00401	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (810 aa)
	D910_05145	PB1 domain-containing protein. (328 aa)
	D910_05873	t-SNARE coiled-coil homology domain-containing protein. (216 aa)
	D910_07356	Uncharacterized protein. (156 aa)
	D910_02392	Uncharacterized protein. (177 aa)
	D910_05685	Uncharacterized protein; Belongs to the synaptobrevin family. (246 aa)
	D910_04642	Uncharacterized protein. (321 aa)
	D910_08428	Uncharacterized protein. (82 aa)
	D910_03235	Uncharacterized protein. (368 aa)
	D910_09097	WD_REPEATS_REGION domain-containing protein. (1158 aa)
	D910_11500	Uncharacterized protein. (1328 aa)
	D910_05698	Uncharacterized protein; Belongs to the synaptobrevin family. (199 aa)
	D910_01951	GOLD domain-containing protein. (239 aa)
	D910_07826	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
	D910_05328	Uncharacterized protein. (215 aa)
	D910_01542	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (776 aa)
	D910_05319	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (508 aa)
	D910_05918	Uncharacterized protein. (140 aa)
	D910_02285	Bap31 domain-containing protein. (230 aa)
	D910_05543	Uncharacterized protein. (139 aa)
	D910_09130	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (217 aa)
	D910_11199	GOLD domain-containing protein. (216 aa)
	D910_03208	Uncharacterized protein. (149 aa)
	D910_11151	GOLD domain-containing protein. (220 aa)
	D910_10318	ER lumen protein-retaining receptor. (212 aa)
	D910_12388	Uncharacterized protein. (825 aa)
	D910_09730	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (331 aa)
	D910_09224	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	D910_11125	Uncharacterized protein. (227 aa)
	D910_08730	ANK_REP_REGION domain-containing protein. (144 aa)
	D910_08588	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (628 aa)
	D910_08957	Uncharacterized protein. (141 aa)
	D910_09336	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (716 aa)
	D910_06052	TDP43_N domain-containing protein. (787 aa)
	D910_07865	GRIP domain-containing protein. (1414 aa)
	D910_08574	Protein YIPF. (222 aa)
	D910_06386	Uncharacterized protein. (382 aa)
	D910_10657	Uncharacterized protein. (1072 aa)
	D910_12088	Uncharacterized protein. (932 aa)
	D910_10566	Uncharacterized protein. (1083 aa)
	D910_10327	WD_REPEATS_REGION domain-containing protein. (994 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00401	D910_02392	U4TRT6	N6U0W4	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.646
D910_00401	D910_02556	U4TRT6	U4TU95	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Sec16 domain-containing protein.	0.957
D910_00401	D910_03208	U4TRT6	J3JU84	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.639
D910_00401	D910_03319	U4TRT6	U4TWG6	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	GOLD domain-containing protein.	0.762
D910_00401	D910_04039	U4TRT6	U4U0L8	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	t-SNARE coiled-coil homology domain-containing protein.	0.828
D910_00401	D910_05145	U4TRT6	N6UM96	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	PB1 domain-containing protein.	0.611
D910_00401	D910_05319	U4TRT6	J3JWP1	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.488
D910_00401	D910_05543	U4TRT6	J3JW02	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.714
D910_00401	D910_05685	U4TRT6	N6TZX5	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.950
D910_00401	D910_05698	U4TRT6	N6T1G7	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.691
D910_00401	D910_07356	U4TRT6	N6U752	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.558
D910_00401	D910_07826	U4TRT6	J3JYN0	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.658
D910_00401	D910_08588	U4TRT6	U4UFV5	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.641
D910_00401	D910_08730	U4TRT6	U4UGD3	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	ANK_REP_REGION domain-containing protein.	0.918
D910_00401	D910_09097	U4TRT6	N6TFP7	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD_REPEATS_REGION domain-containing protein.	0.738
D910_00401	D910_09130	U4TRT6	J3JVV9	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.642
D910_00401	D910_09171	U4TRT6	U4UNZ3	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.513
D910_00401	D910_09224	U4TRT6	U4UP32	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.968
D910_00401	D910_09336	U4TRT6	U4UDG3	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.802
D910_00401	D910_09730	U4TRT6	U4UQK2	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.978