68 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_03638	Uncharacterized protein. (220 aa)
	D910_06682	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	D910_03047	GLUE N-terminal domain-containing protein. (391 aa)
	D910_08804	PX domain-containing protein. (286 aa)
	D910_03933	Uncharacterized protein. (129 aa)
	D910_10059	Uncharacterized protein. (481 aa)
	D910_12202	Uncharacterized protein. (288 aa)
	D910_10709	Uncharacterized protein. (1017 aa)
	D910_00332	Uncharacterized protein. (219 aa)
	D910_06933	Uncharacterized protein. (265 aa)
	D910_05303	Uncharacterized protein. (391 aa)
	D910_10511	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (186 aa)
	D910_05600	Uncharacterized protein. (741 aa)
	D910_11591	Vps16_C domain-containing protein. (391 aa)
	D910_10857	Uncharacterized protein. (1669 aa)
	D910_10949	Uncharacterized protein. (112 aa)
	D910_05873	t-SNARE coiled-coil homology domain-containing protein. (216 aa)
	D910_06392	Uncharacterized protein. (348 aa)
	D910_06141	Uncharacterized protein; Belongs to the VPS28 family. (214 aa)
	D910_00863	Uncharacterized protein. (289 aa)
	D910_01129	DUF5009 domain-containing protein. (563 aa)
	D910_02124	Uncharacterized protein. (212 aa)
	D910_09446	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (929 aa)
	D910_03084	RING-type domain-containing protein. (831 aa)
	D910_00992	PIPK domain-containing protein. (1029 aa)
	D910_03596	Uncharacterized protein. (658 aa)
	D910_05870	Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family. (1044 aa)
	D910_02761	Uncharacterized protein. (4044 aa)
	D910_10483	GRIP domain-containing protein. (1247 aa)
	D910_11162	Uncharacterized protein. (427 aa)
	D910_11250	Pep3_Vps18 domain-containing protein. (947 aa)
	D910_11392	Uncharacterized protein. (1037 aa)
	D910_11606	Uncharacterized protein. (393 aa)
	D910_12600	Uncharacterized protein. (135 aa)
	D910_12738	Uncharacterized protein. (816 aa)
	D910_12827	Uncharacterized protein. (2129 aa)
	D910_00073	Uncharacterized protein. (431 aa)
	D910_09371	Uncharacterized protein. (223 aa)
	D910_09793	Clat_adaptor_s domain-containing protein. (191 aa)
	D910_08742	Uncharacterized protein. (212 aa)
	D910_10140	Uncharacterized protein. (206 aa)
	D910_11390	Uncharacterized protein. (359 aa)
	D910_11604	Uncharacterized protein. (389 aa)
	D910_05250	Uncharacterized protein. (217 aa)
	D910_05355	Uncharacterized protein. (505 aa)
	D910_03371	MFS domain-containing protein. (461 aa)
	D910_04551	Uncharacterized protein. (1503 aa)
	D910_04042	AP-1 complex subunit gamma. (996 aa)
	D910_04373	E3 ubiquitin-protein ligase. (858 aa)
	D910_04647	Uncharacterized protein. (3873 aa)
	D910_05390	Uncharacterized protein. (250 aa)
	D910_04847	RING-type domain-containing protein. (1173 aa)
	D910_08261	Uncharacterized protein. (177 aa)
	D910_06208	Uncharacterized protein. (821 aa)
	D910_09976	Uncharacterized protein; Belongs to the AAA ATPase family. (180 aa)
	D910_06966	Uncharacterized protein. (262 aa)
	D910_09442	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (545 aa)
	D910_08863	Uncharacterized protein. (347 aa)
	D910_07404	Uncharacterized protein. (100 aa)
	D910_09870	VPS37 C-terminal domain-containing protein. (236 aa)
	D910_09370	Uncharacterized protein. (3272 aa)
	D910_11391	Uncharacterized protein. (274 aa)
	D910_11389	Uncharacterized protein. (1320 aa)
	D910_11189	Uncharacterized protein. (735 aa)
	D910_10470	Uncharacterized protein. (666 aa)
	D910_02531	Uncharacterized protein. (259 aa)
	D910_07890	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (252 aa)
	D910_07162	Uncharacterized protein. (155 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00073	D910_03596	U4UZ73	U4U1J0	Uncharacterized protein.	Uncharacterized protein.	0.416
D910_00073	D910_04551	U4UZ73	U4U953	Uncharacterized protein.	Uncharacterized protein.	0.999
D910_00073	D910_10059	U4UZ73	N6SZB5	Uncharacterized protein.	Uncharacterized protein.	0.571
D910_00332	D910_02124	N6TGA5	U4TT48	Uncharacterized protein.	Uncharacterized protein.	0.987
D910_00332	D910_03047	N6TGA5	J3JYD3	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.896
D910_00332	D910_03638	N6TGA5	J3JXU3	Uncharacterized protein.	Uncharacterized protein.	0.997
D910_00332	D910_05303	N6TGA5	N6TTI4	Uncharacterized protein.	Uncharacterized protein.	0.898
D910_00332	D910_05355	N6TGA5	U4U4I4	Uncharacterized protein.	Uncharacterized protein.	0.663
D910_00332	D910_05390	N6TGA5	U4UBM3	Uncharacterized protein.	Uncharacterized protein.	0.997
D910_00332	D910_06141	N6TGA5	N6UMU8	Uncharacterized protein.	Uncharacterized protein; Belongs to the VPS28 family.	0.909
D910_00332	D910_07890	N6TGA5	J3JXJ9	Uncharacterized protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.907
D910_00332	D910_08261	N6TGA5	U4UCZ9	Uncharacterized protein.	Uncharacterized protein.	0.896
D910_00332	D910_08742	N6TGA5	J3JT77	Uncharacterized protein.	Uncharacterized protein.	0.888
D910_00332	D910_08863	N6TGA5	U4UGQ6	Uncharacterized protein.	Uncharacterized protein.	0.889
D910_00332	D910_09371	N6TGA5	J3JUU3	Uncharacterized protein.	Uncharacterized protein.	0.963
D910_00332	D910_09870	N6TGA5	U4UHP9	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.892
D910_00332	D910_09976	N6TGA5	U4UFB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.890
D910_00332	D910_10140	N6TGA5	J3JW90	Uncharacterized protein.	Uncharacterized protein.	0.976
D910_00332	D910_10857	N6TGA5	N6U701	Uncharacterized protein.	Uncharacterized protein.	0.442
D910_00332	D910_11162	N6TGA5	U4UUL4	Uncharacterized protein.	Uncharacterized protein.	0.966