60 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_08525	Uncharacterized protein. (368 aa)
	D910_08524	Uncharacterized protein. (307 aa)
	D910_00051	BH4_AAA_HYDROXYL_2 domain-containing protein. (352 aa)
	D910_01506	Mitogen-activated protein kinase. (372 aa)
	D910_04501	VPS9 domain-containing protein. (1438 aa)
	D910_10679	BH4_AAA_HYDROXYL_2 domain-containing protein. (401 aa)
	D910_06809	Uncharacterized protein. (1379 aa)
	D910_04389	Uncharacterized protein. (461 aa)
	D910_05725	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (136 aa)
	D910_06350	Uncharacterized protein. (1014 aa)
	D910_03175	Protein kinase domain-containing protein. (57 aa)
	D910_07052	Uncharacterized protein. (636 aa)
	D910_06568	Integrin beta. (589 aa)
	D910_06553	Phorbol-ester/DAG-type domain-containing protein. (182 aa)
	D910_03176	SAM domain-containing protein. (405 aa)
	D910_04386	Uncharacterized protein. (428 aa)
	D910_02558	Protein kinase domain-containing protein. (337 aa)
	D910_05726	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (235 aa)
	D910_00163	DOMON domain-containing protein. (438 aa)
	D910_04265	Uncharacterized protein. (414 aa)
	D910_03173	Uncharacterized protein. (472 aa)
	D910_04646	AMP-binding domain-containing protein. (885 aa)
	D910_02848	Uncharacterized protein. (274 aa)
	D910_02847	Uncharacterized protein. (213 aa)
	D910_02837	Uncharacterized protein. (420 aa)
	D910_03174	EphA2_TM domain-containing protein. (73 aa)
	D910_01952	Uncharacterized protein. (862 aa)
	D910_02116	Uncharacterized protein. (448 aa)
	D910_05075	Peptidase_M28 domain-containing protein. (491 aa)
	D910_05115	DOMON domain-containing protein. (587 aa)
	D910_04898	Uncharacterized protein. (195 aa)
	D910_07885	Uncharacterized protein. (149 aa)
	D910_08997	Uncharacterized protein. (661 aa)
	D910_06177	Uncharacterized protein. (501 aa)
	D910_06088	Uncharacterized protein. (191 aa)
	D910_02557	Uncharacterized protein. (99 aa)
	D910_02639	Uncharacterized protein. (450 aa)
	D910_11989	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (331 aa)
	D910_05412	Cyclin-dependent kinase 5 activator. (380 aa)
	D910_08674	Caspase; Belongs to the peptidase C14A family. (425 aa)
	D910_01986	SERPIN domain-containing protein; Belongs to the serpin family. (427 aa)
	D910_00798	Uncharacterized protein. (207 aa)
	D910_07069	Uncharacterized protein. (252 aa)
	D910_02826	Uncharacterized protein. (168 aa)
	D910_10759	Tyrosinase_Cu-bd domain-containing protein. (680 aa)
	D910_11944	Uncharacterized protein. (1255 aa)
	D910_10490	Uncharacterized protein. (185 aa)
	D910_10680	ACT domain-containing protein. (111 aa)
	D910_10669	Cu2_monoox_C domain-containing protein. (113 aa)
	D910_06807	Uncharacterized protein. (2363 aa)
	D910_09895	Flot domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (285 aa)
	D910_06554	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (379 aa)
	D910_09604	Uncharacterized protein. (4680 aa)
	D910_08527	Uncharacterized protein. (131 aa)
	D910_06389	Nitroreductase domain-containing protein. (292 aa)
	D910_05817	DOMON domain-containing protein. (760 aa)
	D910_04388	Uncharacterized protein. (426 aa)
	D910_04293	Uncharacterized protein. (669 aa)
	D910_04200	Uncharacterized protein. (823 aa)
	D910_07148	Fumarylacetoacetase. (421 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00051	D910_04386	U4UYZ8	U4U3T2	BH4_AAA_HYDROXYL_2 domain-containing protein.	Uncharacterized protein.	0.793
D910_00051	D910_04646	U4UYZ8	U4U045	BH4_AAA_HYDROXYL_2 domain-containing protein.	AMP-binding domain-containing protein.	0.815
D910_00051	D910_06389	U4UYZ8	U4UEI0	BH4_AAA_HYDROXYL_2 domain-containing protein.	Nitroreductase domain-containing protein.	0.420
D910_00163	D910_10669	U4U2V8	U4UJU9	DOMON domain-containing protein.	Cu2_monoox_C domain-containing protein.	0.918
D910_00798	D910_01506	J3JXY9	U4V0N8	Uncharacterized protein.	Mitogen-activated protein kinase.	0.559
D910_00798	D910_01952	J3JXY9	U4TUS1	Uncharacterized protein.	Uncharacterized protein.	0.451
D910_00798	D910_04293	J3JXY9	U4UAB7	Uncharacterized protein.	Uncharacterized protein.	0.757
D910_00798	D910_04898	J3JXY9	N6UGC0	Uncharacterized protein.	Uncharacterized protein.	0.652
D910_00798	D910_06088	J3JXY9	N6TXA1	Uncharacterized protein.	Uncharacterized protein.	0.636
D910_00798	D910_06350	J3JXY9	U4U7D6	Uncharacterized protein.	Uncharacterized protein.	0.851
D910_00798	D910_06553	J3JXY9	U4U5J9	Uncharacterized protein.	Phorbol-ester/DAG-type domain-containing protein.	0.579
D910_00798	D910_06554	J3JXY9	U4UH05	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.579
D910_00798	D910_07052	J3JXY9	U4U705	Uncharacterized protein.	Uncharacterized protein.	0.451
D910_00798	D910_07885	J3JXY9	N6U7N9	Uncharacterized protein.	Uncharacterized protein.	0.635
D910_00798	D910_08524	J3JXY9	U4UME9	Uncharacterized protein.	Uncharacterized protein.	0.550
D910_00798	D910_08525	J3JXY9	U4ULY5	Uncharacterized protein.	Uncharacterized protein.	0.550
D910_00798	D910_08527	J3JXY9	U4UFP8	Uncharacterized protein.	Uncharacterized protein.	0.550
D910_00798	D910_10490	J3JXY9	U4UL17	Uncharacterized protein.	Uncharacterized protein.	0.641
D910_01506	D910_00798	U4V0N8	J3JXY9	Mitogen-activated protein kinase.	Uncharacterized protein.	0.559
D910_01506	D910_02557	U4V0N8	N6TSP6	Mitogen-activated protein kinase.	Uncharacterized protein.	0.912