39 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_08068	Ribosomal_L28e domain-containing protein. (137 aa)
	D910_05874	Uncharacterized protein. (115 aa)
	D910_02769	Ribosomal_L16 domain-containing protein. (220 aa)
	D910_02680	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (195 aa)
	D910_08541	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	D910_02855	Uncharacterized protein. (92 aa)
	D910_07230	Uncharacterized protein. (357 aa)
	D910_11269	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	D910_00419	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (190 aa)
	D910_02169	Ribosomal_L7Ae domain-containing protein. (268 aa)
	D910_09836	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
	D910_04299	Uncharacterized protein. (190 aa)
	D910_01079	Uncharacterized protein. (123 aa)
	D910_08073	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (111 aa)
	D910_06616	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	D910_03909	TRASH domain-containing protein. (158 aa)
	D910_11738	Ribosomal_L7Ae domain-containing protein. (116 aa)
	D910_08706	Uncharacterized protein. (144 aa)
	D910_12346	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (150 aa)
	D910_11290	Uncharacterized protein. (217 aa)
	D910_00215	Ribosomal_L6e_N domain-containing protein. (252 aa)
	D910_09260	Uncharacterized protein. (194 aa)
	D910_07817	KOW domain-containing protein. (375 aa)
	D910_06057	Uncharacterized protein. (333 aa)
	D910_05606	Uncharacterized protein. (252 aa)
	D910_02929	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (124 aa)
	D910_05290	Uncharacterized protein. (154 aa)
	D910_02319	Ribosomal_L2_C domain-containing protein. (285 aa)
	D910_02534	Uncharacterized protein. (132 aa)
	D910_12268	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (230 aa)
	D910_11441	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (275 aa)
	D910_11467	Uncharacterized protein. (407 aa)
	D910_07493	Uncharacterized protein. (351 aa)
	D910_07131	Uncharacterized protein. (112 aa)
	D910_04343	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (214 aa)
	D910_08243	Ribos_L4_asso_C domain-containing protein. (412 aa)
	D910_04998	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	D910_04041	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (140 aa)
	D910_02896	Ribosomal protein L37; Binds to the 23S rRNA. (90 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00215	D910_00419	U4UKS6	J3JV68	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.999
D910_00215	D910_01079	U4UKS6	J3JTD2	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein.	0.999
D910_00215	D910_02169	U4UKS6	J3JUY3	Ribosomal_L6e_N domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.999
D910_00215	D910_02319	U4UKS6	U4U2T4	Ribosomal_L6e_N domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.999
D910_00215	D910_02534	U4UKS6	U4TWD4	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein.	0.999
D910_00215	D910_02680	U4UKS6	J3JW76	Ribosomal_L6e_N domain-containing protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
D910_00215	D910_02769	U4UKS6	J3JZ76	Ribosomal_L6e_N domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.999
D910_00215	D910_02855	U4UKS6	J3JVL5	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein.	0.999
D910_00215	D910_02896	U4UKS6	J3JZ97	Ribosomal_L6e_N domain-containing protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
D910_00215	D910_02929	U4UKS6	U4U6C7	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
D910_00215	D910_03909	U4UKS6	J3JYT4	Ribosomal_L6e_N domain-containing protein.	TRASH domain-containing protein.	0.999
D910_00215	D910_04041	U4UKS6	J3JZB3	Ribosomal_L6e_N domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
D910_00215	D910_04299	U4UKS6	J3JTT0	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein.	0.999
D910_00215	D910_04343	U4UKS6	N6T7U0	Ribosomal_L6e_N domain-containing protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
D910_00215	D910_04998	U4UKS6	J3JZF3	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.999
D910_00215	D910_05290	U4UKS6	U4U4D2	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein.	0.999
D910_00215	D910_05606	U4UKS6	U4U795	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein.	0.999
D910_00215	D910_05874	U4UKS6	J3JWP9	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein.	0.999
D910_00215	D910_06057	U4UKS6	U4U8I7	Ribosomal_L6e_N domain-containing protein.	Uncharacterized protein.	0.974
D910_00215	D910_06616	U4UKS6	I6LV97	Ribosomal_L6e_N domain-containing protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999