26 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_01590	Uncharacterized protein. (126 aa)
	D910_02206	Uncharacterized protein. (1072 aa)
	D910_05740	Uncharacterized protein. (269 aa)
	D910_08949	MFS domain-containing protein. (454 aa)
	D910_05738	Synapsin_C domain-containing protein. (282 aa)
	D910_08309	Uncharacterized protein. (488 aa)
	D910_06761	Uncharacterized protein. (295 aa)
	D910_09502	Uncharacterized protein. (270 aa)
	D910_10233	Uncharacterized protein. (779 aa)
	D910_11068	Uncharacterized protein. (451 aa)
	D910_00484	C2 domain-containing protein. (222 aa)
	D910_11655	MFS domain-containing protein. (346 aa)
	D910_12325	FYVE-type domain-containing protein. (242 aa)
	D910_09673	Aa_trans domain-containing protein. (457 aa)
	D910_08419	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (386 aa)
	D910_02277	Uncharacterized protein. (197 aa)
	D910_12117	MARVEL domain-containing protein. (209 aa)
	D910_03488	Uncharacterized protein. (543 aa)
	D910_06666	t-SNARE coiled-coil homology domain-containing protein. (156 aa)
	D910_05858	MARVEL domain-containing protein. (227 aa)
	D910_07306	Uncharacterized protein. (264 aa)
	D910_01592	Aa_trans domain-containing protein. (159 aa)
	D910_01591	Uncharacterized protein. (469 aa)
	D910_01613	Uncharacterized protein. (128 aa)
	D910_00834	Uncharacterized protein. (1581 aa)
	D910_02937	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (227 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00834	D910_08309	U4TZI3	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.576
D910_01590	D910_08309	U4U0X7	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.564
D910_01591	D910_08309	U4TTW9	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.564
D910_01592	D910_08309	U4TRV9	U4UD35	Aa_trans domain-containing protein.	Uncharacterized protein.	0.665
D910_01613	D910_08309	U4TW84	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.564
D910_02206	D910_05738	U4U2F4	U4UCQ6	Uncharacterized protein.	Synapsin_C domain-containing protein.	0.415
D910_02206	D910_05740	U4U2F4	U4U7R1	Uncharacterized protein.	Uncharacterized protein.	0.415
D910_02206	D910_08309	U4U2F4	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.673
D910_02937	D910_08309	U4TZQ8	U4UD35	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Uncharacterized protein.	0.667
D910_05738	D910_02206	U4UCQ6	U4U2F4	Synapsin_C domain-containing protein.	Uncharacterized protein.	0.415
D910_05738	D910_05740	U4UCQ6	U4U7R1	Synapsin_C domain-containing protein.	Uncharacterized protein.	0.923
D910_05738	D910_08309	U4UCQ6	U4UD35	Synapsin_C domain-containing protein.	Uncharacterized protein.	0.779
D910_05738	D910_11655	U4UCQ6	U4UVZ0	Synapsin_C domain-containing protein.	MFS domain-containing protein.	0.506
D910_05738	D910_12117	U4UCQ6	N6TII9	Synapsin_C domain-containing protein.	MARVEL domain-containing protein.	0.610
D910_05740	D910_02206	U4U7R1	U4U2F4	Uncharacterized protein.	Uncharacterized protein.	0.415
D910_05740	D910_05738	U4U7R1	U4UCQ6	Uncharacterized protein.	Synapsin_C domain-containing protein.	0.923
D910_05740	D910_08309	U4U7R1	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.779
D910_05740	D910_11655	U4U7R1	U4UVZ0	Uncharacterized protein.	MFS domain-containing protein.	0.506
D910_05740	D910_12117	U4U7R1	N6TII9	Uncharacterized protein.	MARVEL domain-containing protein.	0.610
D910_06761	D910_08309	U4UFP1	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.621