16 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_03933	Uncharacterized protein. (129 aa)
	D910_07043	Uncharacterized protein. (375 aa)
	D910_05791	Uncharacterized protein. (1962 aa)
	D910_08492	Uncharacterized protein. (3571 aa)
	D910_07045	PXA domain-containing protein. (584 aa)
	D910_03895	PX domain-containing protein. (415 aa)
	D910_03863	PX domain-containing protein. (167 aa)
	D910_03198	DUF3480 domain-containing protein. (575 aa)
	D910_07306	Uncharacterized protein. (264 aa)
	D910_03197	FYVE-type domain-containing protein. (778 aa)
	D910_08991	PX domain-containing protein. (463 aa)
	D910_10836	PX domain-containing protein. (280 aa)
	D910_12827	Uncharacterized protein. (2129 aa)
	D910_09022	RING-CH-type domain-containing protein. (352 aa)
	D910_07430	FYVE-type domain-containing protein. (781 aa)
	D910_06422	Uncharacterized protein. (277 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_03197	D910_03198	U4TY92	U4U0F6	FYVE-type domain-containing protein.	DUF3480 domain-containing protein.	0.830
D910_03198	D910_03197	U4U0F6	U4TY92	DUF3480 domain-containing protein.	FYVE-type domain-containing protein.	0.830
D910_03863	D910_03895	U4U778	U4U7A6	PX domain-containing protein.	PX domain-containing protein.	0.675
D910_03863	D910_08991	U4U778	N6TY49	PX domain-containing protein.	PX domain-containing protein.	0.591
D910_03863	D910_12827	U4U778	U4UYT9	PX domain-containing protein.	Uncharacterized protein.	0.723
D910_03895	D910_03863	U4U7A6	U4U778	PX domain-containing protein.	PX domain-containing protein.	0.675
D910_03895	D910_08991	U4U7A6	N6TY49	PX domain-containing protein.	PX domain-containing protein.	0.982
D910_03895	D910_12827	U4U7A6	U4UYT9	PX domain-containing protein.	Uncharacterized protein.	0.544
D910_05791	D910_06422	U4UES4	J3JTB8	Uncharacterized protein.	Uncharacterized protein.	0.969
D910_06422	D910_05791	J3JTB8	U4UES4	Uncharacterized protein.	Uncharacterized protein.	0.969
D910_08991	D910_03863	N6TY49	U4U778	PX domain-containing protein.	PX domain-containing protein.	0.591
D910_08991	D910_03895	N6TY49	U4U7A6	PX domain-containing protein.	PX domain-containing protein.	0.982
D910_08991	D910_12827	N6TY49	U4UYT9	PX domain-containing protein.	Uncharacterized protein.	0.544
D910_12827	D910_03863	U4UYT9	U4U778	Uncharacterized protein.	PX domain-containing protein.	0.723
D910_12827	D910_03895	U4UYT9	U4U7A6	Uncharacterized protein.	PX domain-containing protein.	0.544
D910_12827	D910_08991	U4UYT9	N6TY49	Uncharacterized protein.	PX domain-containing protein.	0.544