64 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_11294	Uncharacterized protein. (792 aa)
	D910_11215	Uncharacterized protein. (377 aa)
	D910_09935	Uncharacterized protein. (756 aa)
	D910_10525	TFCD_C domain-containing protein. (1164 aa)
	D910_09502	Uncharacterized protein. (270 aa)
	D910_07097	DUF3668 domain-containing protein. (781 aa)
	D910_09339	Uncharacterized protein. (1844 aa)
	D910_06217	Nucleoplasmin domain-containing protein. (232 aa)
	D910_09186	Uncharacterized protein. (909 aa)
	D910_06147	Uncharacterized protein. (1351 aa)
	D910_08340	Uncharacterized protein. (748 aa)
	D910_05608	N-acetyltransferase domain-containing protein. (203 aa)
	D910_06050	Uncharacterized protein. (163 aa)
	D910_12651	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (152 aa)
	D910_08163	Uncharacterized protein. (260 aa)
	D910_05011	Uncharacterized protein. (294 aa)
	D910_05405	Uncharacterized protein. (211 aa)
	D910_08341	Uncharacterized protein. (445 aa)
	D910_03899	Uncharacterized protein. (1064 aa)
	D910_07513	Uncharacterized protein. (1318 aa)
	D910_06269	Uncharacterized protein. (465 aa)
	D910_02652	Uncharacterized protein. (310 aa)
	D910_04993	Uncharacterized protein. (497 aa)
	D910_03897	Uncharacterized protein. (621 aa)
	D910_03855	Uncharacterized protein. (976 aa)
	D910_04483	Uncharacterized protein. (1778 aa)
	D910_05188	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (796 aa)
	D910_01208	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (446 aa)
	D910_01142	TACC_C domain-containing protein. (956 aa)
	D910_03898	Uncharacterized protein. (441 aa)
	D910_02881	Uncharacterized protein. (3988 aa)
	D910_02310	GAR domain-containing protein. (392 aa)
	D910_00420	Uncharacterized protein. (772 aa)
	D910_12095	Uncharacterized protein. (659 aa)
	D910_02309	Uncharacterized protein. (86 aa)
	D910_01131	TPR_MLP1_2 domain-containing protein. (2339 aa)
	D910_08304	Uncharacterized protein. (92 aa)
	D910_02272	Uncharacterized protein. (342 aa)
	D910_07498	Uncharacterized protein. (458 aa)
	D910_00614	Uncharacterized protein. (2440 aa)
	D910_02009	PH domain-containing protein. (1213 aa)
	D910_04733	Uncharacterized protein. (607 aa)
	D910_10028	GB1/RHD3-type G domain-containing protein. (551 aa)
	D910_03335	AAA domain-containing protein; Belongs to the AAA ATPase family. (547 aa)
	D910_06343	Uncharacterized protein. (176 aa)
	D910_07583	Uncharacterized protein. (283 aa)
	D910_08934	Uncharacterized protein. (191 aa)
	D910_06602	Uncharacterized protein. (230 aa)
	D910_08164	ANK_REP_REGION domain-containing protein. (591 aa)
	D910_05665	Uncharacterized protein; Belongs to the AAA ATPase family. (627 aa)
	D910_08873	HORMA domain-containing protein. (204 aa)
	D910_04426	DUF667 domain-containing protein. (199 aa)
	D910_05912	IPPc domain-containing protein. (450 aa)
	D910_11358	MATH domain-containing protein. (467 aa)
	D910_12156	Uncharacterized protein. (296 aa)
	D910_12037	Uncharacterized protein. (129 aa)
	D910_09598	Uncharacterized protein. (7028 aa)
	D910_11902	Uncharacterized protein. (141 aa)
	D910_10792	DUF667 domain-containing protein. (346 aa)
	D910_11292	Uncharacterized protein. (333 aa)
	D910_12038	Uncharacterized protein. (161 aa)
	D910_08162	Roc domain-containing protein. (384 aa)
	D910_11806	Ubiquitin-like domain-containing protein. (478 aa)
	D910_11356	B box-type domain-containing protein. (157 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00614	D910_05405	N6TVD3	U4UBN6	Uncharacterized protein.	Uncharacterized protein.	0.863
D910_00614	D910_06269	N6TVD3	U4U768	Uncharacterized protein.	Uncharacterized protein.	0.863
D910_00614	D910_08162	N6TVD3	U4UKX0	Uncharacterized protein.	Roc domain-containing protein.	0.672
D910_00614	D910_08163	N6TVD3	U4UCN6	Uncharacterized protein.	Uncharacterized protein.	0.672
D910_00614	D910_08164	N6TVD3	N6T055	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.672
D910_00614	D910_09339	N6TVD3	U4UG58	Uncharacterized protein.	Uncharacterized protein.	0.863
D910_00614	D910_09598	N6TVD3	U4UQ65	Uncharacterized protein.	Uncharacterized protein.	0.685
D910_00614	D910_11215	N6TVD3	U4UIS1	Uncharacterized protein.	Uncharacterized protein.	0.863
D910_01142	D910_01208	U4TZV3	U4U020	TACC_C domain-containing protein.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.402
D910_01142	D910_07513	U4TZV3	U4U8B4	TACC_C domain-containing protein.	Uncharacterized protein.	0.878
D910_01142	D910_08162	U4TZV3	U4UKX0	TACC_C domain-containing protein.	Roc domain-containing protein.	0.606
D910_01142	D910_08163	U4TZV3	U4UCN6	TACC_C domain-containing protein.	Uncharacterized protein.	0.606
D910_01142	D910_08164	U4TZV3	N6T055	TACC_C domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.606
D910_01142	D910_09186	U4TZV3	U4UFT0	TACC_C domain-containing protein.	Uncharacterized protein.	0.624
D910_01142	D910_12651	U4TZV3	U4UQL3	TACC_C domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.510
D910_01208	D910_01142	U4U020	U4TZV3	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	TACC_C domain-containing protein.	0.402
D910_01208	D910_09186	U4U020	U4UFT0	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.402
D910_02272	D910_08162	N6U0T7	U4UKX0	Uncharacterized protein.	Roc domain-containing protein.	0.457
D910_02272	D910_08163	N6U0T7	U4UCN6	Uncharacterized protein.	Uncharacterized protein.	0.457
D910_02272	D910_08164	N6U0T7	N6T055	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.457