8 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_04862	USP domain-containing protein; Belongs to the peptidase C19 family. (733 aa)
	D910_10017	Uncharacterized protein. (289 aa)
	D910_08035	Uncharacterized protein. (589 aa)
	D910_02368	HDAg domain-containing protein. (593 aa)
	D910_07648	RRM domain-containing protein. (271 aa)
	D910_04894	Uncharacterized protein. (624 aa)
	D910_07582	Uncharacterized protein. (433 aa)
	D910_06374	Uncharacterized protein. (536 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_02368	D910_04894	N6U3R5	N6UGB4	HDAg domain-containing protein.	Uncharacterized protein.	0.996
D910_02368	D910_07648	N6U3R5	N6UEI7	HDAg domain-containing protein.	RRM domain-containing protein.	0.991
D910_02368	D910_08035	N6U3R5	N6TV53	HDAg domain-containing protein.	Uncharacterized protein.	0.994
D910_04894	D910_02368	N6UGB4	N6U3R5	Uncharacterized protein.	HDAg domain-containing protein.	0.996
D910_04894	D910_07648	N6UGB4	N6UEI7	Uncharacterized protein.	RRM domain-containing protein.	0.993
D910_04894	D910_08035	N6UGB4	N6TV53	Uncharacterized protein.	Uncharacterized protein.	0.995
D910_06374	D910_08035	U4UEH0	N6TV53	Uncharacterized protein.	Uncharacterized protein.	0.434
D910_06374	D910_10017	U4UEH0	N6TK44	Uncharacterized protein.	Uncharacterized protein.	0.762
D910_07648	D910_02368	N6UEI7	N6U3R5	RRM domain-containing protein.	HDAg domain-containing protein.	0.991
D910_07648	D910_04894	N6UEI7	N6UGB4	RRM domain-containing protein.	Uncharacterized protein.	0.993
D910_07648	D910_08035	N6UEI7	N6TV53	RRM domain-containing protein.	Uncharacterized protein.	0.993
D910_08035	D910_02368	N6TV53	N6U3R5	Uncharacterized protein.	HDAg domain-containing protein.	0.994
D910_08035	D910_04894	N6TV53	N6UGB4	Uncharacterized protein.	Uncharacterized protein.	0.995
D910_08035	D910_06374	N6TV53	U4UEH0	Uncharacterized protein.	Uncharacterized protein.	0.434
D910_08035	D910_07648	N6TV53	N6UEI7	Uncharacterized protein.	RRM domain-containing protein.	0.993
D910_10017	D910_06374	N6TK44	U4UEH0	Uncharacterized protein.	Uncharacterized protein.	0.762