29 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_11634	Uncharacterized protein. (796 aa)
	D910_02531	Uncharacterized protein. (259 aa)
	D910_10968	Uncharacterized protein. (412 aa)
	D910_10002	Uncharacterized protein. (597 aa)
	D910_02201	Uncharacterized protein. (548 aa)
	D910_01408	Uncharacterized protein. (366 aa)
	D910_02363	LAM_G_DOMAIN domain-containing protein. (150 aa)
	D910_04382	CNH domain-containing protein. (1043 aa)
	D910_08304	Uncharacterized protein. (92 aa)
	D910_10003	HECT domain-containing protein. (238 aa)
	D910_02309	Uncharacterized protein. (86 aa)
	D910_01861	Uncharacterized protein. (157 aa)
	D910_02310	GAR domain-containing protein. (392 aa)
	D910_02361	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (2100 aa)
	D910_04065	Uncharacterized protein. (446 aa)
	D910_01161	Uncharacterized protein. (358 aa)
	D910_01911	WD_REPEATS_REGION domain-containing protein. (477 aa)
	D910_05952	USP domain-containing protein; Belongs to the peptidase C19 family. (363 aa)
	D910_04067	Uncharacterized protein. (191 aa)
	D910_04373	E3 ubiquitin-protein ligase. (858 aa)
	D910_04383	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (198 aa)
	D910_07546	PID domain-containing protein. (469 aa)
	D910_08651	Uncharacterized protein. (915 aa)
	D910_05579	Uncharacterized protein. (1655 aa)
	D910_08492	Uncharacterized protein. (3571 aa)
	D910_10608	Cbl-PTB domain-containing protein. (181 aa)
	D910_10764	Uncharacterized protein. (782 aa)
	D910_12066	Arrestin_C domain-containing protein. (252 aa)
	D910_00083	Uncharacterized protein. (239 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00083	D910_04373	U4UT05	U4UAI6	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.921
D910_00083	D910_08651	U4UT05	U4UBL1	Uncharacterized protein.	Uncharacterized protein.	0.659
D910_00083	D910_10608	U4UT05	U4UH44	Uncharacterized protein.	Cbl-PTB domain-containing protein.	0.929
D910_00083	D910_10968	U4UT05	N6T883	Uncharacterized protein.	Uncharacterized protein.	0.930
D910_01161	D910_01408	U4TZZ5	N6U2J6	Uncharacterized protein.	Uncharacterized protein.	0.602
D910_01408	D910_01161	N6U2J6	U4TZZ5	Uncharacterized protein.	Uncharacterized protein.	0.602
D910_02201	D910_04373	N6TPG3	U4UAI6	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.910
D910_02201	D910_10002	N6TPG3	N6TD39	Uncharacterized protein.	Uncharacterized protein.	0.566
D910_02201	D910_10003	N6TPG3	N6U987	Uncharacterized protein.	HECT domain-containing protein.	0.566
D910_02361	D910_10764	U4TY67	U4ULX5	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.489
D910_02363	D910_10764	N6U3Q9	U4ULX5	LAM_G_DOMAIN domain-containing protein.	Uncharacterized protein.	0.489
D910_02531	D910_04373	J3JX47	U4UAI6	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.688
D910_02531	D910_10002	J3JX47	N6TD39	Uncharacterized protein.	Uncharacterized protein.	0.602
D910_02531	D910_10003	J3JX47	N6U987	Uncharacterized protein.	HECT domain-containing protein.	0.602
D910_04065	D910_04067	U4TYE3	U4U7R5	Uncharacterized protein.	Uncharacterized protein.	0.410
D910_04067	D910_04065	U4U7R5	U4TYE3	Uncharacterized protein.	Uncharacterized protein.	0.410
D910_04373	D910_00083	U4UAI6	U4UT05	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.921
D910_04373	D910_02201	U4UAI6	N6TPG3	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.910
D910_04373	D910_02531	U4UAI6	J3JX47	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.688
D910_04373	D910_05952	U4UAI6	U4U662	E3 ubiquitin-protein ligase.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.425